Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1083 ATGGTGAACCCCTTGGTGGAACGTGCCACGAGCGACATGCTTATCGGTCCTGATTGGGCCTTGAACCTCGAGATCTGTGACATACTCAACAACGATCCTGGGCAAGCAAAGGATGTTGTTAAAGGTATAAAGAAGCGGATTGGAAGTAAAAATTCCAAAGTTCAACTTCTTGCACTAACTCTGCTGGAGACAATCATAAAGAATTGTGGGGATATTGTTCACATGCATGTTGCAGAGAAAGATGTTCTTCATGAGATGGTGAAAGTAGTAAAGAAGAAGCCTGATTCTCATGTCAGAGAGAAGATACTGATTCTTATTGATACCTGGCAAGAAGCTTTTGGAGGGCCAAGGGCAAGATATCCACAGTACTATGCTGCATACCAGGAACTGTTGCGTGCCGGGGCAGTATTCCCTCAGAGGTCTGAGCAATCTGCACCTGTATTCACACCGCTACAGACACATCCATTGACATCATACCCTCAAAATATTCGGGACATTGATGCTCGGCAGCACACAGCTGAGTCCTCATCAGCTGAGTCTGAGTTTCCAACCCTAAGTTTGACTGAAATTCAGAATGCACGTGGTATCATGGATGTTCTTTCAGAAATGCTCAATGCTTTAGACCCTGGAAATAAAGAAGGGCTTAGGCAGGAGGTTATAGTTGATTTGGTAGAGCAGTGTAGAACTTACAAGCAGAGAGTGGTACACCTTGTAAACTCAACTTCTGATGAGTCACTGCTATGCCAAGGTCTTTCTCTGAATGATGATCTGCAGCGTGTGCTGGCCAAGCATGAATCCATTGCGTCAGGAACTTCTGCTCAAAATCGCACTGAGAAACCAAAGTCTGCATCTACTGGAGCACTTGTAGATGTTGATGGTCCTCTGATTGATGCAGGAGATTCTAGTAAACAAAGCAATGGGAGGTCACCATCTAGTGCTGAAGCAGGGTCCCAAACATTGAATCAGTTATTGCTTCCTGCACCCCCCACATCAAATGGTTCAGGCACACCTGCAAATGTCGATCCCAAATTGGACCTGCTCAGTGGTGATGACTATAACTCGCCAAAAGCAGAGACTTCACTTGCTCTTGTTCCTCTAGGAGAACAACAGCCAGCCAGTCCAATGAATCAGCAGAATGCCCTTATTCTTTTTGATACGTTTTCTAATGGCAACAATGCACCTGCTCCTGTTAACACCCAGCCCAAGAATGTTGCTGGCCAAACCAGTCCATTATCCCCCCAATTTCAGCAACAGCAGACTTTCATGTCTCAAGGTGTATATTACCCCAACGGGAGTATGCCAAATATGGGGTCACCTCGGTATGAGCAATCACCATATGCACAACAAAGCACAGGTCCTGCTTGGAATGGTCAGGTCGCCCAGCAGCAACAGCCACCTTCACCAGTTTATGGTACACAAAGTGGTGGATCATTGCCGCCACCTCCTTGGGAAGCTCAACCCACAGACAATGGTAGTCCAGTAGCTGGCGCCCAATATCCACAGCCACTGCAAGTCACGCAAGTGGTTATGACACATGTTCAGAGTGCTCAACATCCTCAGAGACCTCAGGCAATGGGGAACAACCAAATGTACATGCTGCCAAATGCTAACAGCTATGCCGCTCAAAGCAATCAATTGGCCTTGCACCCTCAGCAGATTCAGGGTGTTGCTGGTCCCTACATGGGTATGGTTCCACATCAAATGCAAAATGGTCCTGTGGCTTACATGTATCCTCAACAAATGTATGGCAACCAATATGCCGGATACGGCTATGGTCAGCAGCAAGGGGTTCAATATGTTGAGCAGCAAATGTATGGTTTATCTATGAGAGATGATAATGGTCTGAGGAACTCTTACCAAGTTTCTGCTACATCTTATGTGCCACCTGGGAAGCCTACCAAGCCAGAGGATAAGTTATTTGGAGACCTTGTTGACATGGCGAAAGTGATGCCAAAAAGCCCAAAATCTGCTCCAGACCGAGGTGGTAGGGTGTAG 1995 0.4662 MVNPLVERATSDMLIGPDWALNLEICDILNNDPGQAKDVVKGIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAEKDVLHEMVKVVKKKPDSHVREKILILIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSEQSAPVFTPLQTHPLTSYPQNIRDIDARQHTAESSSAESEFPTLSLTEIQNARGIMDVLSEMLNALDPGNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLSLNDDLQRVLAKHESIASGTSAQNRTEKPKSASTGALVDVDGPLIDAGDSSKQSNGRSPSSAEAGSQTLNQLLLPAPPTSNGSGTPANVDPKLDLLSGDDYNSPKAETSLALVPLGEQQPASPMNQQNALILFDTFSNGNNAPAPVNTQPKNVAGQTSPLSPQFQQQQTFMSQGVYYPNGSMPNMGSPRYEQSPYAQQSTGPAWNGQVAQQQQPPSPVYGTQSGGSLPPPPWEAQPTDNGSPVAGAQYPQPLQVTQVVMTHVQSAQHPQRPQAMGNNQMYMLPNANSYAAQSNQLALHPQQIQGVAGPYMGMVPHQMQNGPVAYMYPQQMYGNQYAGYGYGQQQGVQYVEQQMYGLSMRDDNGLRNSYQVSATSYVPPGKPTKPEDKLFGDLVDMAKVMPKSPKSAPDRGGRV* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1083 664 MobiDBLite consensus disorder prediction 392 498 - -
Dod09g1083 664 CDD GAT_GGA_like_plant 189 267 - -
Dod09g1083 664 Pfam VHS domain 4 129 IPR002014 GO:0035091|GO:0043130
Dod09g1083 664 PANTHER TOM1-LIKE PROTEIN 1 652 IPR044836 GO:0035091|GO:0043130|GO:0043328
Dod09g1083 664 MobiDBLite consensus disorder prediction 392 474 - -
Dod09g1083 664 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Dod09g1083 664 Gene3D - 1 148 IPR008942 -
Dod09g1083 664 CDD VHS 2 132 - -
Dod09g1083 664 ProSiteProfiles GAT domain profile. 181 269 IPR004152 GO:0035091|GO:0043130
Dod09g1083 664 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Dod09g1083 664 MobiDBLite consensus disorder prediction 299 338 - -
Dod09g1083 664 Gene3D - 184 277 IPR038425 -
Dod09g1083 664 MobiDBLite consensus disorder prediction 268 282 - -
Dod09g1083 664 SUPERFAMILY GAT-like domain 141 270 - -
Dod09g1083 664 MobiDBLite consensus disorder prediction 268 353 - -
Dod09g1083 664 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Dod09g1083 664 Pfam GAT domain 195 269 IPR004152 GO:0035091|GO:0043130
Dod09g1083 664 PANTHER TARGET OF MYB PROTEIN 1 1 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1083 Dod-Chr9 31496275 31503059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1083 - - gmx:100805762 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1083 09 31496275 31503059 Dod09g1083 09 31496275 31503059 ECH