LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod09g1080	ATGGCCGCCCCCGACTACGAAGAGGCACGCGGCGGCACCGGCAGCGCCGCCTACGAAGACCACCGCCAACCGCCGCAGGACCTCGGCTACGACCCGAACTTCGTCCCAGACTCCGTCAGATCCTTCGTTGTCCACCTCTACCGCCACATCCGCGAGAAGAACGTGTATGAGATCCACCAGATGTACGAGAACTCCTTCCACACTCTCTCCGACCGCCTCTTCAAGGACACGCCGTGGCCCTCCGTCGACGCCGTGGCTCACTACGTCGACAACGACCACGTGTTCTGCCTCCTCTACCGCGAGATGTGGTTCCGCCACCTCTACGCGCGCTTGACCCCCACGCTCCGCCAGAGGATCGACTCGTGGGACAACTACTGCAGCCTGTTCCAGGTGGTGCTCCACGGCGTCGTCAACATGCAGCTCCCGAACCAGTGGCTTTGGGACATGGTTGATGAGTTCGTGTACCAGTTCCAGAGCTTCTGCCAGTACCGCGCCAAGATGAAGAACAAGACCGAGCAAGAGATCGCTCTCTTGCGCCAGTTTGATCAGGCTTGGAATGTTTATGGGGTTCTGAACTTCTTGCAAGCGCTAGTGGAGAAGTCCATGATTATTCAGATTCTTGAGCAGGAGAAGGAGGGGCTGGAGCAGTTCACTTCCACTGATGGGTATGATTACAATGGAGGGAGTAATGTGTTGAAGGTCTTGGGGTATTTCAGCATGGTTGGCTTGCTGCGAGTGCATTGTCTTTTGGGCGATTATCACACAGGACTCAAGTGCTTACTTCCCATTGATATTAGTCAACAAGGGGTTTACACTAGTGTTATTGGCAGCCACATTACTACCATATATCACTATGGCTTTGCTAATCTCATGCTGCGCAGATATGTTGAAGCAATTCGCGAATTTAACAAAATTCTCTTATACATATATAAGACAAAGCAGTATCATCAGAAATCGCCACAATATGAGCAGATATTGAAGAAGAATGAACAAATGTATGCCTTGCTGGCAATTTGCCTTTCACTCTGCCCCCAAACCAGGCTTGTTGATGAAACTGTGAACTCTCAGTTGCGAGAAAAGTATGGTGAAAAGATGATTAGAATGCAAAGATATGATGATGAGGCATTTGCTATTTATGATGAGCTCTTCTCTTATGCATGTCCCAAGTTCATCACCCCTTCAGCACCCAGTTTTGAGGAGCCTCTAGTAAATTACAACCAGGATGCTTATAGACTTCAATTGAAACTGTTCCTTTATGAAGCAAAGCAACAGCAGCTGCTATCAGGTGTCCGTACCTTCTTAAAGGTGTATTCAACAATCTCCCTTGCAAAACTTGCAAGTTATATGGAAGTGGATGAACCCACCTTAAGGACTATCTTGATGACATACAAGCATAAGACACATGCTGTTGATGCTGATGGGAAAATTATATCCAATGCTGATGTGGATTTCTACATTGATGATGACATGATTCATGTTGTGGAGTCTAAGCCTGCCAAGCGATATGGGGATTATTTTTTGCGACAGATTGCCAAGCTTGAAGGGGTGATCAATGATATGGACAGCGTAAAACTGGAGTGA	1581	0.4826	MAAPDYEEARGGTGSAAYEDHRQPPQDLGYDPNFVPDSVRSFVVHLYRHIREKNVYEIHQMYENSFHTLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVYGVLNFLQALVEKSMIIQILEQEKEGLEQFTSTDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIYKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQTRLVDETVNSQLREKYGEKMIRMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLAKLASYMEVDEPTLRTILMTYKHKTHAVDADGKIISNADVDFYIDDDMIHVVESKPAKRYGDYFLRQIAKLEGVINDMDSVKLE*	527

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod09g1080	526	Pfam	RNA polymerase I-associated factor PAF67	117	512	IPR019382	GO:0003743\|GO:0005737\|GO:0005852
	Dod09g1080	526	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT L	30	525	-	-
	Dod09g1080	526	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 3	30	525	IPR019382	GO:0003743\|GO:0005737\|GO:0005852
	Dod09g1080	526	Hamap	Eukaryotic translation initiation factor 3 subunit L [EIF3L].	18	515	IPR019382	GO:0003743\|GO:0005737\|GO:0005852
	Dod09g1080	526	MobiDBLite	consensus disorder prediction	1	23	-	-
	Dod09g1080	526	ProSiteProfiles	PCI domain profile.	301	500	IPR000717	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod09g1080	K15029		-	gmx:100804691	993.416

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod09g1080	09	31475004	31480654	Dod09g1080	09	31475004	31480654	ECH