Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1079 ATGCGCCCACCGGTTCCTTTCGAAACTACCACCTCCTCTTGTTATTATTCTTCTTCTTCAAGTGCTGATCGCAGGCTCAACACACTCGCAAGGCACGTCGTCGAAATGTCTTCTGAGAACCAAAACATCTCTGCTTCGCCAACTGCGGCCTCCCATGGCCATGGCGGTTCCTCCGTGTTCGCTCACCTCGTCCGCGCTCCCGAAGATCCTATCCTCGGTGTGACTGTCGCTTACAACAAGGATCCAAGCCCTGTTAAGCTCAATTTGGGTGTTGGTGCTTACCGAACTGAGGATGGGAAACCTCTTGTATTGAATGTGGTGAGGCGTGTTGAACAGCAACAAGTGAATGACCTGTCACGCAACAAGGAATATCTTCCAATTGTTGGGCTCGCTGATTTCAATAAATTGAGTGCCAAGCTCATTTTTGGTGCTGACAGTCCTGCTATTCAAGAGAACAGGGTCACCACCGTTCAATGCTTGTCTGGTACTGGTTCATTGAGGGTTGGGGGTGAATTTTTGGCTAAACACTATCACCAACGGACTATATACTTGCCTCAACCAACTTGGGGCAATCACCCAAAGGTTTTCACCTTGGCAGGGCTATCTGTCAAAACATATCGCTACTATGCTCCAGCAACACGTGGGCTTGACTTCCAAGGACTTATGGAAGATCTTGGTTCTGCCGCATCTGGATCTGTTATTTTGCTACATGCATGCGCACATAATCCTACTGGTGTTGATCCAACCCCCGAGCAATGGGAGCAGATAAGGCAGCTGATTAGATCAAAATCTTTGTTACCTTTCTTTGACAGTGCTTATCAGGGTTTTGCTAGTGGAAGTCTAGATGCAGATGCACAGCCTGTTCGTATGTTTGTTGCTGATGGTGGTGAATTGCTGGTAGCACAGAGCTATGCAAAGAACATGGGTCTTTACGGAGAGCGTGTTGGTGCCTTAAGCATTGTCTGCAAGTCAGCTGATGTTGCAAGCAAGGTTGAGAGCCAGGTGAAACTTGTGATTAGGCCCATGTACTCGAATCCTCCCATTCATGGTGCATCCATTGTTGCGGCCATTCTCAAGGACCGGGATTTGTACAATGAATGGACTATTGAGTTGAAGGGAATGGCTGACCGTATCATCAGTATGCGCCAACAACTTTTTGATGCTTTGCGTGCCAGAGGCACACCTGGTGATTGGAGTCACATCATCAAGCAGATCGGAATGTTTACTTTCACGGGATTGAATCCGGAGCAAGTTTCTTTCATGACTAAAGAGTACCATATTTACATGACATCCGATGGGAGGATTAGCATGGCCGGTCTAAGTTCCAAAACAGTCCCTCATCTGGCGGACGCAATACATGCAGCTGTGACTGGAGCTGTCTAA 1383 0.4779 MRPPVPFETTTSSCYYSSSSSADRRLNTLARHVVEMSSENQNISASPTAASHGHGGSSVFAHLVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEDGKPLVLNVVRRVEQQQVNDLSRNKEYLPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQCLSGTGSLRVGGEFLAKHYHQRTIYLPQPTWGNHPKVFTLAGLSVKTYRYYAPATRGLDFQGLMEDLGSAASGSVILLHACAHNPTGVDPTPEQWEQIRQLIRSKSLLPFFDSAYQGFASGSLDADAQPVRMFVADGGELLVAQSYAKNMGLYGERVGALSIVCKSADVASKVESQVKLVIRPMYSNPPIHGASIVAAILKDRDLYNEWTIELKGMADRIISMRQQLFDALRARGTPGDWSHIIKQIGMFTFTGLNPEQVSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAIHAAVTGAV* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1079 460 CDD AAT_like 87 440 - -
Dod09g1079 460 PANTHER ASPARTATE AMINOTRANSFERASE 57 458 - -
Dod09g1079 460 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 303 316 IPR004838 GO:0003824|GO:0009058|GO:0030170
Dod09g1079 460 Pfam Aminotransferase class I and II 86 452 IPR004839 GO:0009058|GO:0030170
Dod09g1079 460 Gene3D Aspartate Aminotransferase, domain 1 65 452 IPR015422 GO:0003824
Dod09g1079 460 PANTHER ASPARTATE AMINOTRANSFERASE 57 458 IPR000796 GO:0006520|GO:0008483
Dod09g1079 460 Gene3D - 119 360 IPR015421 GO:0003824
Dod09g1079 460 PRINTS Aspartate aminotransferase signature 333 358 IPR000796 GO:0006520|GO:0008483
Dod09g1079 460 PRINTS Aspartate aminotransferase signature 401 419 IPR000796 GO:0006520|GO:0008483
Dod09g1079 460 PRINTS Aspartate aminotransferase signature 265 277 IPR000796 GO:0006520|GO:0008483
Dod09g1079 460 PRINTS Aspartate aminotransferase signature 234 253 IPR000796 GO:0006520|GO:0008483
Dod09g1079 460 SUPERFAMILY PLP-dependent transferases 58 456 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1079 Dod-Chr9 31469022 31473927 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1079 K14454 - gmx:547509 775.778