LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod09g1069	ATGGCTCCACCGCCACCACAGTCTCAGCGATCTCCCTCACCGTCGCAACCATCAGGGAAGAGTGAGGTTTCTGATCTGAGAACACAGCTCCGGCAGTTTGCTGGGAGCCGAGCTCCCGGTGCGGATGATGCCAAGAGGGATCTCTTCAAGAAAGTGATCTCCAACATGACAATAGGTATCGATGTCTCGTCGCTTTTCGGCGAGATGGTGATGTGCTCGGCAACCTCGGACATTGTTCTGAAGAAAATGTGCTACTTGTATGTTGGGAACTATGCCAAGGTCAATCCTGATCTGGCGCTCTTGACGATTAATTTTCTGCAAAGAGATTGCAAGGATGAGGATCCGATGATCCGGGGACTGGCATTGAGGAGTTTGTGTTCCCTCCGAGTTGCAAACCTGGTGGAGTATTTGGTTGGGCCATTAGGGTCTGGGTTAAAGGACAATAATAGTAATGTAAGGATGGTGGCGGTTATTGGGGTTTTGAAACTCTATCATATATCAGCTTCAACCTGTATGGATGCAGATTTTCCAGCAACTTTGAAGCATTTGATGCTTAATGACCCTGATACTCAGGTAGTTGCAAATTGTTTGTCCTCTCTACAAGAGATTTGGACCTTAGAATTGACAACATCAGAGGAAGCAGCTAGGGAGAGAGAAACTCTTCTTAGCAAGCCAACTATATATTACCTTTTAAATCGCATTAAAGAATTTAGTGAATGGGCACAATGTCTTGTGCTCGAATTGGTGGCCAAGTACATCCCATCGGATAGCAGTGAAATATTTGATGTAATGAATCTCCTTGAAGATAGACTCCAACATGCAAATGGTGCTGTTGTCTTGGCAACTGTTAAAGTATTTCTGCAGCTGACGTTGTCAATGGCTGATGTTCATCAGCAGGTTTATGAGCGTATCAAAGCCCCTCTCCTAACTCAAGTGAGCTCGGGAAGTCCAGAGCAATCCTATGCAGTTTTAAGTCACCTGCATCTCTTGGTCATGCGTGCACCATATATATTTTCCTCAGACTACAAACACTTCTATTGCCAGTATAATGAACCATCATATGTCAAAAAGTTGAAGCTTGAAATGCTGACTGCAGTTGCAAATGAAAGTAATACCTATGAGATAGTGACGGAGTTATGTGAATATGCCGCAAATGTTGACATTCCAATTGCAAGGGAGTCAATTCGGGCTGTTGGGAAGATAGCATTGCAGCAATATGACGTCAATGCTATTGTTGATCGGCTTCTACAGTTTCTTGAGATGGAAAAGGACTATGTCACTTCTGAAGCTCTGGTGCTTGTGAAAGATCTCCTAAGAAAATATCCACAATGGAGTCAGGATTGTATTGCTGTTGTTGGGAATATCAGTAGCAAAAATGTCCAAGAGCCCAAGGCTAAGGCAGCTCTTATATGGATGTTGGGGGAATACTCTCAGGATATGCATGACGCTCCATATGTGTTGGAGAGTTTGATTGAAAATTGGGATGAGGAACATTCTGCTGAGGTTCGCTTACATCTTCTGACTGCAGTTATGAAGTGTTTCTTTAAGAGACCACCTGAAACTCAGAAAGCATTGGGGGCTGCTTTAGCTGCAGGTCTTGCCGATTTTCATCAGGATGTTCACGATAGGGCCTTATTTTATTACAGGCTGCTGCAATACAAAGTTTCTGTGGCAGAGTGTGTGGTGAACCCTCCAAAGCAAGCAGTTTCAGTATTTGCTGATACTCAGAGCAGTGAGATCAAAGATCGCATTTTTGATGAATTTAACAGTTTGTCTGTTATATATCAAAAGCCTTCTTATATGTTCACTGATAAAGAACACCGAGGGACATTTGAATTTTCAGATGAACTTGGAAACCTATCTATTAGTGCGGAACCTGGAGATTCTGCTGTTCCAGCTCAGAGATTGGAGGCAAGTGACAATGATCTGCTTTTAACTACCACAGACAAAGAGGAAGGTAGAGATGCTGCTAGCAATGGTTCTGCCTATAGTGCTCCTTCCTATAATGGTACAACTGCCACTTCTGCAACTTCACAACCACTTGCAGATTTGGCATTTTCAAGCAGTGTAACTAGTCAAGCTCCAGCATCGAGCTTGGCAATCGATGATCTGCTTGGTTTAGATTTTTCAGTTGGGACTGCAGCCACTCCTTCGCCTCCTCCATTGAATCTCAACCCAAAAGCTGTCCTGGATCCAGGCGCGTTTCAGCAGAAATGGCGTCAACTGCCAATATCTTTATCTGAGGAGTATTCTATGAGTCCTCAAGGAGTTGCATCGTTGACAAGTCCCAATGCACTCCTTCGGCACATGCAAAGCCATTCAATACACTGCATTGCATCCGGTGGTCAGTCTCCTAACTTCAAGTTCTTCTTCTTTGCTCAAAAAGCAGAGTCAGCAACAGTATATCTCGTTGAGTGTATAATCAACACAGCGTCTGCCAAGTCACAGATTAAAATAAAAGCTGATGACCAAAGTACATCTCAGGCATTCTCAACTTTATTCCAATCAGCTTTGTCCAAGTTTGGTTTGTCTTGA	2535	0.4363	MAPPPPQSQRSPSPSQPSGKSEVSDLRTQLRQFAGSRAPGADDAKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSNVRMVAVIGVLKLYHISASTCMDADFPATLKHLMLNDPDTQVVANCLSSLQEIWTLELTTSEEAARERETLLSKPTIYYLLNRIKEFSEWAQCLVLELVAKYIPSDSSEIFDVMNLLEDRLQHANGAVVLATVKVFLQLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAVLSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSEALVLVKDLLRKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMHDAPYVLESLIENWDEEHSAEVRLHLLTAVMKCFFKRPPETQKALGAALAAGLADFHQDVHDRALFYYRLLQYKVSVAECVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVIYQKPSYMFTDKEHRGTFEFSDELGNLSISAEPGDSAVPAQRLEASDNDLLLTTTDKEEGRDAASNGSAYSAPSYNGTTATSATSQPLADLAFSSSVTSQAPASSLAIDDLLGLDFSVGTAATPSPPPLNLNPKAVLDPGAFQQKWRQLPISLSEEYSMSPQGVASLTSPNALLRHMQSHSIHCIASGGQSPNFKFFFFAQKAESATVYLVECIINTASAKSQIKIKADDQSTSQAFSTLFQSALSKFGLS*	845

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod09g1069	844	MobiDBLite	consensus disorder prediction	647	674	-	-
	Dod09g1069	844	MobiDBLite	consensus disorder prediction	660	674	-	-
	Dod09g1069	844	Pfam	Adaptin N terminal region	34	552	IPR002553	GO:0006886\|GO:0016192\|GO:0030117
	Dod09g1069	844	MobiDBLite	consensus disorder prediction	1	25	-	-
	Dod09g1069	844	SMART	B2_adapt_app_C_2	722	839	IPR015151	GO:0006886\|GO:0016192\|GO:0030131
	Dod09g1069	844	PIRSF	Beta_adaptin	11	844	IPR016342	GO:0015031\|GO:0030276
	Dod09g1069	844	Pfam	Beta2-adaptin appendage, C-terminal sub-domain	725	838	IPR015151	GO:0006886\|GO:0016192\|GO:0030131
	Dod09g1069	844	Gene3D	-	15	610	IPR011989	-
	Dod09g1069	844	PANTHER	AP-4 COMPLEX SUBUNIT BETA-1	17	842	-	-
	Dod09g1069	844	SUPERFAMILY	ARM repeat	31	599	IPR016024	-
	Dod09g1069	844	Gene3D	-	712	842	IPR012295	-
	Dod09g1069	844	PANTHER	ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER	17	842	IPR026739	GO:0016192

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod09g1069	Dod-Chr9	31348518	31362679	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod09g1069	-		-	gmx:100801153	1513.82

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod09g1069	09	31348518	31362679	Dod09g1069	09	31348518	31362679	ECH