Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1046 ATGGGGATAACAGAAGCATGCTCCAGGTTCATTGGAGACTTCTTTCAGGCATTCAAATGCTCACCAGCAAGCTCGATATCCCACCTTGATCACAATCATCATCATACATGCAAGCCCCTCAAGCTTGATGACAACATGGCTCGTGCTCTTGTGACTGTCTTTGGCATGGAAAACAATGGAAGAATCAAGAAGGAAAATGCTAGGAAAGTGGTGGAGAAGCTTGGTTTGGTGCATGGTTCTGAGGAGGAGGACAAGCTCTCAATTGGGTTTGAGCTACATGGGGAGGGTGGTAACTTAGAGGATGATGAAGTGCCTGTGGAAGAGGTGCTTGGTGAGTTGGAGGACATGTCAAGGCGCAGTGAGCTGTTGCATGAAGCCTTCAAAATCTTTGATGAGGATGGGGATGGATACATAGATGCAATGGAGTTGAAGAGGGTGCTTGATTGCTTGGGTTTGGACAAAGGTTGGGACATGAACACAATTGAGAAGATGGTGAAGGCTGTAGATTTGAACCTTGATGGCAAGGTTGATTTCGGTGAGTTTGAATTGATGATGGGGTAG 561 0.4635 MGITEACSRFIGDFFQAFKCSPASSISHLDHNHHHTCKPLKLDDNMARALVTVFGMENNGRIKKENARKVVEKLGLVHGSEEEDKLSIGFELHGEGGNLEDDEVPVEEVLGELEDMSRRSELLHEAFKIFDEDGDGYIDAMELKRVLDCLGLDKGWDMNTIEKMVKAVDLNLDGKVDFGEFELMMG* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1046 186 SUPERFAMILY EF-hand 48 185 IPR011992 -
Dod09g1046 186 Gene3D - 38 186 - -
Dod09g1046 186 PANTHER CALCIUM-BINDING PROTEIN CML42 107 185 - -
Dod09g1046 186 SMART efh_1 160 186 IPR002048 GO:0005509
Dod09g1046 186 SMART efh_1 122 150 IPR002048 GO:0005509
Dod09g1046 186 ProSiteProfiles EF-hand calcium-binding domain profile. 118 153 IPR002048 GO:0005509
Dod09g1046 186 CDD EFh 123 181 IPR002048 GO:0005509
Dod09g1046 186 Pfam EF-hand domain pair 122 185 IPR002048 GO:0005509
Dod09g1046 186 ProSiteProfiles EF-hand calcium-binding domain profile. 156 186 IPR002048 GO:0005509
Dod09g1046 186 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 107 185 - -
Dod09g1046 186 ProSitePatterns EF-hand calcium-binding domain. 131 143 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1046 Dod-Chr9 30915945 30916728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1046 123 185 EF-hand Containing Proteins AT4G20780 58.730 5.42e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1046 - - adu:107470962 286.574