Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1001 ATGATGGTAGCGACAATTACAAGGAGGCAATCACTAATAAGGAGGCCTGTTAGGATCATTGCATTGGTTGCTGTGCTGTCCCTTTTTATGATTGCTGCCTACAACATTTATCCATCAACATACCAATTGGGAACATGTTACTTCTTTTCCTCTCAAGGTTGTCGTCCATATGACCTGCGCCCACCAATTGTGTACTCAAGGGAGCTAACTGATGATGAGATAGAATCCCGGGTTGTCATTAAGGATTTGCTCAAGTTTCAACCTGTTGCAACCAACGTCCCCAAGATTGCCTTTTTGTTCTTGACTCCTGCTTCATTGCCCTTTGAGAAACTCTGGCACAAGTTTTTTGAAGGTCATGAGGGCAGATTCTCAATTTATGTACATGCATCCAGGGCAAGACCAGTACATGTCAGCCATTATTTTGCTGGCAGAGACATCCGCAGTGAATCGGTAGGTTGGGGAAAAGTTTCTATGGTTAAGGCAGAAAGAAGGCTTTTGGCAAATGCACTTTTAGACACTGATAACCAACATTTTGTCTTGCTATCTGAAAGTTGTATACCTGTGCGCCCCTTTGACTTCGTTTACAACTACTTATTGTTTTCAAATGTCAGCTTCCTTGAATGCTACATTGATCTTGGCCCTCATGGAAATGGAAGGTATATACGCTATATGTTGCCTGAAGTAGAGGAGAAGGATTTCCGAAAAGGTTCACAGTGGTTCACAATGAAACGCCAGCATGCATTAATAGTTATGGCAGACAGTCTCTATTTCACAAAATTCAAAAAACACTGCAGGCCAAATATGGAGGGAGGACGCAACTGCTATGCCGATGAGCATTACTTGCCAACCTTTTTCCATATGATTGATCCAGGTGGAATTTCAAATTGGTCGGTAACCTTTGTTGATTGGTCTGAAGGAAAATGGCATCCAAGATCATTCAATGTTGAGGATATAACTAATGAACTCCTGCGAGCCTTAACATCAATTGATGAATGTCGACATATTACAAGTGATGAAAAGAGGACAACGTTGCTTACACCTTGCATGTGGAGTGGGAAAAGACGACCTTGTTATCTATTTGCCAGGAAGTTTCACCCAGAGGCTCTGGATAATTTGTTGAAACTCTTCTCGAATTATTCATCATTGTAG 1149 0.4169 MMVATITRRQSLIRRPVRIIALVAVLSLFMIAAYNIYPSTYQLGTCYFFSSQGCRPYDLRPPIVYSRELTDDEIESRVVIKDLLKFQPVATNVPKIAFLFLTPASLPFEKLWHKFFEGHEGRFSIYVHASRARPVHVSHYFAGRDIRSESVGWGKVSMVKAERRLLANALLDTDNQHFVLLSESCIPVRPFDFVYNYLLFSNVSFLECYIDLGPHGNGRYIRYMLPEVEEKDFRKGSQWFTMKRQHALIVMADSLYFTKFKKHCRPNMEGGRNCYADEHYLPTFFHMIDPGGISNWSVTFVDWSEGKWHPRSFNVEDITNELLRALTSIDECRHITSDEKRTTLLTPCMWSGKRRPCYLFARKFHPEALDNLLKLFSNYSSL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1001 382 Pfam Core-2/I-Branching enzyme 96 326 IPR003406 GO:0016020|GO:0016757
Dod09g1001 382 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 6 381 IPR044174 GO:0016757
Dod09g1001 382 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 6 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1001 Dod-Chr9 30345280 30348879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1001 - - lja:Lj1g3v1965170.2 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1001 09 30345280 30348879 Dod09g1001 09 30345280 30348879 ECH