Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0999 ATGGACCGCGTGGCCGACCAGACATTCCGAAGGTACACGTCCAATAATGCCAAGAGGAGTGGCAAAGGAACAGCCATTGTCTGGTTCAGAAACGACCTCAGGGTGTTGGACAATGAGCCTCTCCATCAGGCATGGCTTTCCTCTCAAACTCTGCTCCCCGTCTACTGTGTTGACCCTCGACTATTTGCCACCACTTATCATTTTGGATTTCCAAAAACCGGAGCATTGAGAGCGCAATTTCTCCTTGAATGCTTGGCTGACTTGCGGAAGAATTTGTTGAAACGGGGACTTAATTTGCTTATTCAACATGGGAAGCCTGAAGAGATTCTTCCTTCCCTCGCAAAAGCCTTTGAAGCTCATACCGTGTATGCCCAGAAAGAAACTTGCAGTGAAGAGCTGAATGTTGAAAGGTTAGTCATAAGAGGTCTTAAACAAGTGGTGATACCACCTGATGAATCCACTGGTTCGACAAGTTCGAACAAATTCCCTAAGCTACAGTTGATTTGGGGTAGCACCATGTACCACATTGATGACCTCCCTTTTGATGCCACTGATTTACCAGATGTGCTGTTGAAGCCAAATGTACCATACGCTCATGCAGTCAAACTTGCTGCCTCTCTTGGACCGCCTCCACTAGTTGACGATTGGGGATGTCTTCCTTCATTGGAGCAGCTGGGACTTTGCTCACAGAATCTTAGCAAAGGGATGAAATTCGTAGGGGGTGAAAGTGCAGCATTGAGCAGAGTTTATGAATACATTTGGAAGAAGGATTTGCTAAAGGTATATAAAGAGACCAGAAATGGGATGTTAGGGCCTGATTACTCTACTAAATTCTCACCATGGCTTGCCTCAGGAAGTTTGTCGCCTCGTTTCATACATGAAGAGGTGAAGCGATATGAGAATGAAAGGCTAGCAAATAGTTCTACCTACTGGGTTTTGTTCGAGTTGATATGGAGGGATTACTTCAGGTTTTTATCAGTGAAATATGGGAATTCCCTTTTCTATTTAGGTGGCCCAAGGAAAGTTCAGCGCAATTGGAGCCAAGACAAGATTTTGTTTGAATCCTGGAGCGATAGGTCAGACAGGGTATCCTCTGGTAGATGCCAACATGAAAGAACTAAAAACTACAGGGTTTATGTCAAACCGAGGACGGCAGATTGTGTGTTCCTTTCTTGTTCGTGA 1182 0.4501 MDRVADQTFRRYTSNNAKRSGKGTAIVWFRNDLRVLDNEPLHQAWLSSQTLLPVYCVDPRLFATTYHFGFPKTGALRAQFLLECLADLRKNLLKRGLNLLIQHGKPEEILPSLAKAFEAHTVYAQKETCSEELNVERLVIRGLKQVVIPPDESTGSTSSNKFPKLQLIWGSTMYHIDDLPFDATDLPDVLLKPNVPYAHAVKLAASLGPPPLVDDWGCLPSLEQLGLCSQNLSKGMKFVGGESAALSRVYEYIWKKDLLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRFIHEEVKRYENERLANSSTYWVLFELIWRDYFRFLSVKYGNSLFYLGGPRKVQRNWSQDKILFESWSDRSDRVSSGRCQHERTKNYRVYVKPRTADCVFLSCS* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0999 393 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 236 357 IPR036134 -
Dod09g0999 393 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 22 190 IPR036155 -
Dod09g0999 393 PANTHER CRYPTOCHROME DASH 10 358 - -
Dod09g0999 393 Pfam DNA photolyase 25 189 IPR006050 -
Dod09g0999 393 TIGRFAM crypto_DASH: cryptochrome, DASH family 24 358 IPR014133 GO:0003913|GO:0006281
Dod09g0999 393 Gene3D - 171 334 - -
Dod09g0999 393 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 23 158 IPR006050 -
Dod09g0999 393 PANTHER CRYPTOCHROME 10 358 IPR002081 -
Dod09g0999 393 Gene3D HUPs 1 170 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0999 Dod-Chr9 30314330 30317506 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0999 K25656 - gmx:100783312 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0999 09 30314330 30317506 Dod09g0999 09 30314330 30317506 ECH