Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0979 ATGCTGAGGAAGAGGAGCAGGTCACTTCAGAAGGATCAACACCACATGGTTCACATGACAAACTCTGATTCTAATTCGGATCACCACTCTCAGTTCCTTGCTTTGGGGCGCAACATTCAAAGCCACTCAATTTTCAATGCCCCTTCTCTTTTTGTGGGGTTGGGTCCTAAGTGCTTGTTGGATGCTGATTCAGTTAGGAGCCCCACTTCTCCACTAGATGCTAGAGTTCTTTCAAATCTAGGCAACCATGTTAGGACTCCAAGATCATCATCACAATCTCATCATCCCCATGAGGGTCACCAAAGGAGCTGGGATTGCTGCAAAGTTGGCCTTAGCCTTATAGATTCCCTGGAAGACTGTTCTAAGTTCTCTGGGAAGATTCTAAGGTCTTCAGAAAGCAAGAACATTTGTCTCAGTCCCAAAATGATGATCAAGGCCCCAAATTGCCCAACCTGTTTTGATTCCTTTGAGTCATCCAAGTCTTTGCCAAAAGATTTCTGTAAGGCTCCTCCTTGTGCCCAAAATGGACCTGGTTTCCACAAGGTTGACTCCAGGGTTCCTTTTGAGATCGGAGATAGTGGCTTAGATCATGAGCTATTTGGGAAAACTAGGTCCTGTTCATTGGACTCTTGTAGTCCATTGAAAACCCTCTCTGGTTTAACCACTCCCAACACTGTTCCAAGCAGTGATGATTTTGCTGTGAAAGATAGCACCATCAAATTGAGCCTTCCTCCTCATTTTATTGGAGGGGGCCAGAACTCAAATATCTTCCCAACTGCTGAGATGAGTTCAAACAGAGTTTCCATAGGCTCTTCCAGTGAATTCATCAAGTCTTTATCTGCTAGTGAGATTGAGCTCTCTGAAGACTACACATGTGTGATTTCCCATGGCCCCAATCCCAAAACAACTCATATTTTTGGTGATTGCATCTTGGAAACTCATTCTAATTCTAATGAATTTAAAAACCATCTTAAGAATGAAGAGAAGGAAAAGGGTGTGTCCCTGGTAAGTAACAGGCTGCATGCTCCAATCCACTATCCCTCTAGTGAGTTCTTAAGTTTCTGCCACCATTGCAACAAGAAGCTGGAAGAGGGAAAAGATATTTACATTTATAGGGGTGAAAAAGCATTTTGCACTTTAACTTGCCGTGCCTTGGAGATCATGAATGACGAGAAACTAGAGGAATCCAACACTCCTTCTGAGAACTCACCAACAAAACATGAAGTTGGTGAGCAAATTTTTGAGACAGGCATCCTCACAACTACATAA 1269 0.4318 MLRKRSRSLQKDQHHMVHMTNSDSNSDHHSQFLALGRNIQSHSIFNAPSLFVGLGPKCLLDADSVRSPTSPLDARVLSNLGNHVRTPRSSSQSHHPHEGHQRSWDCCKVGLSLIDSLEDCSKFSGKILRSSESKNICLSPKMMIKAPNCPTCFDSFESSKSLPKDFCKAPPCAQNGPGFHKVDSRVPFEIGDSGLDHELFGKTRSCSLDSCSPLKTLSGLTTPNTVPSSDDFAVKDSTIKLSLPPHFIGGGQNSNIFPTAEMSSNRVSIGSSSEFIKSLSASEIELSEDYTCVISHGPNPKTTHIFGDCILETHSNSNEFKNHLKNEEKEKGVSLVSNRLHAPIHYPSSEFLSFCHHCNKKLEEGKDIYIYRGEKAFCTLTCRALEIMNDEKLEESNTPSENSPTKHEVGEQIFETGILTTT* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0979 422 PANTHER DUF581 FAMILY PROTEIN 1 420 - -
Dod09g0979 422 PANTHER FCS-LIKE ZINC FINGER 11 1 420 IPR044585 -
Dod09g0979 422 ProSiteProfiles Zinc finger FLZ-type profile. 350 394 IPR007650 -
Dod09g0979 422 MobiDBLite consensus disorder prediction 1 28 - -
Dod09g0979 422 Pfam zinc-finger of the FCS-type, C2-C2 346 392 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0979 Dod-Chr9 30085397 30088015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0979 - - lang:109328586 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0979 09 30085397 30088015 Dod09g0979 09 30085397 30088015 ECH
Dod08g1624 08 38104239 38106873 Dod09g0979 09 30085397 30088015 PCT