Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0970 ATGGCCAACAATCTGGCTTCGGAGCCGATGCCTAGCATGCAGATAGCTCAGCTGCAGCCAATTGTGAGCAAAGTCGATTCGTCAGGGAGACAGACGGAAATGGGGAACTTCGGTCCTGTATATGGTGATCCCATGTCACAGCAACAGGCAACCTCGAATGATCATGCTGGGCCTGGTGACCACAGGTCTCAGGGCTTATCGATTTCGGTTATGCAGAGTGGTCAGGTAGAAGCACACAGGAGTAATATGGGGCAACAGCAACTGTCAACAACTCCCAAGCGGAAGGCACCGATGGAACTATCATCTAGTAGTTCTGTGGGATCTAACAAGCGGGTTGCACAGATGGGAAATCGACCTTGGTTGCGGCAAGCATCTAATACGTCAAACAAAGGTTCTGCTCAGATGCAATCCCCACGGCCACAGCATTTGGCACAATCTAGTAAGAGAAAAACACAGACAGAATCTACTTCCGGTAAATCAGGTACACCTCGGTCCTCTAATCCTAAAAGTCAGAATACCCAGATGAAGCAGTCCGCCAAGGTTCAAACTGAATCTTCTGAAAGTGTTAGGTCCAAGATGAGGGAGTCATTAGCTGCTGCTCTGGCCTTGGTTTCTAAGCAAGATAAAACTCTTCCCACAAACAGTAATTCAATGAACTATGCTGCAAGTGCTCAGGGTAAATTAGAGAGCAGTTCTCAGTGGGCTGGCTCAGCATCTGCTTCTGAGGATACTGCTTCAGAGCAAAGGCAGGACGTTTCTCAATCTGTTCATTCTTCTTTTGTTGCAGTTGGTTCAGTTGACCATGTGACTGGAGACCAAAAAGAGGGTACAACCTCTAATGAAGATTTTTCTGAAAAATTCAAGGATTTTGAAGCAGGATCCACAATTGTATCAAATAACGAAAATATACTGGGTTCTATGCAAGGCATGAACTGTGATAAGCAAGACTTCCAGTCAAGTTACACTCTGACTACTGATGATGTTCCATTCAGTGACAGTTTTTTTGTGAAAGATGAACTGTTGCAGGGAAATGGTCTTTCATGGGTATTATCTGATATGATGGGCATGGACAATCAAAGGGAAAGTCAGAATATTATAGAGCAGAGATCAGAACCTGAGGAAATAGGTGGAGGTTGTGGGGAGGCAGTCCCTTCACCTGACCTTTTAGCATCAAGGATTGAAGCGGAACTCTTCAAACTGTTTGGAGGTGCGAATAAGAAGTACAAAGAGAAGGGGAGGTCCCTTTTATTCAATCTGAAAGATCGAAATAATCCTGAACTAAGAGAAAGGGTTATGTCTGGTGAAATTCCCCCAGAACGATTGTGTTCCATGACTGCAGAGGAACTTGCTTCAAAGGAGCTTTCCCAATGGCGGATAGCCAAGGCTGAGGAGTTTGCTCAAATGGTGGTTTTACCTGATTCAGATGCTGATGTTAGACGTTTAGTCAAGAAAACACATAAAGGTGAATTTCAAGTTGAAGTTGATCATGGAGACAATGTCCCAATAGAGGAGGTCTCTGGTGGCACCACGTCAATTGCTCGAAGCCAAACAATTGAAAAGGATGGGGAAGCCTCTTCTCCTCCCAAACCTGATGTGGTCAACGGCAAAGAGAACACTGATGGTGAGAGGAGCAATGTACAGAAGGGTAATGCATTTCCCATTACCATTTCATCCAATGATGGGACTGATCCAATGCAAGGGCTCATGACTGATGATGCATTGAAGGACGCTGACTTTCTTCCGCCAATTGTCTCTCTTGATGAATTCATGGAATCACTTAATTCTGAGCCACTGTTCGAAAATTTACCAGTGGAATCAGGAAAAGCAACACGTGTCTCAGACAAGGATGATTCTGAGGTTGGATCTAAATCAAAATCTTCTGATTTAACTCCAAGTGAGCAAGCCAAGGTCACCTCTGAGAAGTTTGAGAAAATCCAAAGCACACGTGACACTGTCAATCCGGATGCAGAAGGGGAAAAACGGGTTAATGCAGAATCTGGGGCCATTTCTTCTGATACAAGATGCAGTGAGAGTCAAGTTGACATAAAGCCAACTGATGGTCATACCAAGGAAAGGTCAACTGATGACAGGAAGTCTGCTTCCAGCGATGCCGAGCTCAAAACCAGCCACTTTCATGCAGAAGAGAGATATGGTAATAATAATGCGTATTCAAAAACTGCAGTAACCACTAAGGGTGAATGCATCTGGGAGGGAGTGCTTCAGTTGAATATCTCTACCACTCATTCAGTCATAAGCATATTTAAAAGTGGGGAGAGAACTTCTGCGAAAGACTGGCCTGGGTTTCTTGAGATCAAGGGAAGGGTTCGACTTGATGCATTTGAGAAATTTTTGCAAGAGCTTCCTCAGTCCAGAAGTCGTGCTATCATGGTTTCACATTTTGTTTCGAAAGCGTCGTCTCCCAGCCAGCAATCGACTCTTCATGAGGTGGCTGAGTCTTACGTTTCTGACGAGAGAGTGGGATTCGCTGAGCCTATGACTGGAGTTGAACTTTACTTTTGCCCACCTCATAACAAAACAGTTGAAATGCTCAGCAAGATACTTCCAAAGGAACAAATTGAGGCAGTTAATTCTATTGATAATGGCCTAATTGGTATAATTGTATGGAGAAAAACTAATTTAACCTCAATATCACCCACCGCTTCATCACATCACAAACATAGCTCTAAAAGGCAACACTTTTCTAGGAGACAGCAAGATAGTAATGTGAATGCTAATCCCTACCACACAGCAGTGCCCTCTACGGGCTATAAGAGCACCGAGGCTGGACCCCCACGCGATGATGATGACGATGACGATGAGGATATTCCTCCAGGATTCGGGCCACCTGTGGCCCGAGCTGAGGATGACCTCCCCGAGTTCAAATTCTCGGGTGGCTCAAACACATCATCACGCGTTGTCCAAAGACCTATGGGACCTGGTATGGTACCATTACACTCGGTTAACCAAGCCCCATCACGCCCTGTAGAACAAATGAGGGAGCTTGTGCACAAATATGGGCAAAACAAAGCAAATGCGCCACCTTCAGTTAACTGGCAGGATAAATTTGGGGGTTCCATTCAGCCCTGGAATGATGATGACGATGATATACCTGAATGGCAGCCTCAAAACTCACAGAATCAGTTGCATCCTCTATTGGCAATGCACAACTCTCATCTTAGACCTCACATGATGAATCAACCGTTTGCGGGGTCACCCCAGCAGCCAATTATGCCAACACAATATCTGCAACCCCCTATGACTGTGACGCATGGCCAACGAAACTTTGGACCCCAGTGGACTCCTTCCCAGGGAAATAACCTGCAGCCAAGTGGTGGGCAGCACTATGGTGCGTCAGTTCAAGGCACACCCTGGCCTAATAATGTTGCTAGGAGTAGGGGATTTTAG 3405 0.4549 MANNLASEPMPSMQIAQLQPIVSKVDSSGRQTEMGNFGPVYGDPMSQQQATSNDHAGPGDHRSQGLSISVMQSGQVEAHRSNMGQQQLSTTPKRKAPMELSSSSSVGSNKRVAQMGNRPWLRQASNTSNKGSAQMQSPRPQHLAQSSKRKTQTESTSGKSGTPRSSNPKSQNTQMKQSAKVQTESSESVRSKMRESLAAALALVSKQDKTLPTNSNSMNYAASAQGKLESSSQWAGSASASEDTASEQRQDVSQSVHSSFVAVGSVDHVTGDQKEGTTSNEDFSEKFKDFEAGSTIVSNNENILGSMQGMNCDKQDFQSSYTLTTDDVPFSDSFFVKDELLQGNGLSWVLSDMMGMDNQRESQNIIEQRSEPEEIGGGCGEAVPSPDLLASRIEAELFKLFGGANKKYKEKGRSLLFNLKDRNNPELRERVMSGEIPPERLCSMTAEELASKELSQWRIAKAEEFAQMVVLPDSDADVRRLVKKTHKGEFQVEVDHGDNVPIEEVSGGTTSIARSQTIEKDGEASSPPKPDVVNGKENTDGERSNVQKGNAFPITISSNDGTDPMQGLMTDDALKDADFLPPIVSLDEFMESLNSEPLFENLPVESGKATRVSDKDDSEVGSKSKSSDLTPSEQAKVTSEKFEKIQSTRDTVNPDAEGEKRVNAESGAISSDTRCSESQVDIKPTDGHTKERSTDDRKSASSDAELKTSHFHAEERYGNNNAYSKTAVTTKGECIWEGVLQLNISTTHSVISIFKSGERTSAKDWPGFLEIKGRVRLDAFEKFLQELPQSRSRAIMVSHFVSKASSPSQQSTLHEVAESYVSDERVGFAEPMTGVELYFCPPHNKTVEMLSKILPKEQIEAVNSIDNGLIGIIVWRKTNLTSISPTASSHHKHSSKRQHFSRRQQDSNVNANPYHTAVPSTGYKSTEAGPPRDDDDDDDEDIPPGFGPPVARAEDDLPEFKFSGGSNTSSRVVQRPMGPGMVPLHSVNQAPSRPVEQMRELVHKYGQNKANAPPSVNWQDKFGGSIQPWNDDDDDIPEWQPQNSQNQLHPLLAMHNSHLRPHMMNQPFAGSPQQPIMPTQYLQPPMTVTHGQRNFGPQWTPSQGNNLQPSGGQHYGASVQGTPWPNNVARSRGF* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0970 1134 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 35 1120 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 119 186 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 233 261 - -
Dod09g0970 1134 SMART mid_6 357 460 IPR003618 GO:0006351
Dod09g0970 1134 PANTHER SPOC DOMAIN / TRANSCRIPTION ELONGATION FACTOR S-II PROTEIN 35 1120 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 65 112 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 1 193 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 904 923 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 517 570 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 233 285 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 609 623 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 42 58 - -
Dod09g0970 1134 ProSiteProfiles TFIIS central domain profile. 361 477 IPR003618 GO:0006351
Dod09g0970 1134 MobiDBLite consensus disorder prediction 544 565 - -
Dod09g0970 1134 Pfam Transcription factor S-II (TFIIS), central domain 374 464 IPR003618 GO:0006351
Dod09g0970 1134 Pfam SPOC domain 731 875 IPR012921 -
Dod09g0970 1134 Gene3D - 356 452 IPR036575 GO:0006351
Dod09g0970 1134 SUPERFAMILY Elongation factor TFIIS domain 2 385 453 IPR036575 GO:0006351
Dod09g0970 1134 MobiDBLite consensus disorder prediction 679 713 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 637 662 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 597 713 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 1 34 - -
Dod09g0970 1134 MobiDBLite consensus disorder prediction 884 971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0970 Dod-Chr9 29945529 29951464 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0970 - - gmx:100808809 1558.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0970 09 29945529 29951464 Dod09g0970 09 29945529 29951464 ECH