Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0943 ATGCACAAGGCTCCGCTTTCCTTCCAAGTCCTCTTGTGTCTCACCCTGTCAATACTGTTCATCCACTCCTCATATGGTGATGTTGGCACTTCTGCCCAATATGGCCCTCCCTTTTTACCCACAGCATGTTTTGGGAAAGATGCATCACAGTTTCCATCCAGCAACATGTTTGGCTCAGCAGGGGAAGGCATATGGGACAATGGTGCTGCATGTGGGAGGCAGTATCAGGTGAGGTGCATCAGTGCAGCTGCACCAAGGACTTGCGTTCCTGGCCAGACCATTCAGATCAAGATCGTTGACCGTGCTCAATCCTCAGTTTCTAGGCCTTCCAGGGGGGGAACTTCCATGGTGCTCTCCTCCACTGCCTTCCAGGCCATTGCAAATGCTTCTGCATCCTTGATTAACATTGAGTTTCAACAGGTTTAA 426 0.5047 MHKAPLSFQVLLCLTLSILFIHSSYGDVGTSAQYGPPFLPTACFGKDASQFPSSNMFGSAGEGIWDNGAACGRQYQVRCISAAAPRTCVPGQTIQIKIVDRAQSSVSRPSRGGTSMVLSSTAFQAIANASASLINIEFQQV* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0943 141 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 141 IPR007112 -
Dod09g0943 141 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 9 141 - -
Dod09g0943 141 Gene3D - 24 141 IPR036908 -
Dod09g0943 141 SUPERFAMILY Barwin-like endoglucanases 16 141 IPR036908 -
Dod09g0943 141 Pfam Lytic transglycolase 64 137 IPR009009 -
Dod09g0943 141 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 9 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0943 Dod-Chr9 29334279 29339718 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0943 - - gmx:100803494 224.172