Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0942 ATGTGGAATTATACCCCACCACTCCCACCAGCACCACTATCCACCACCACCAGGGTTCTCTCCCTCACAAACCCGATTGCTCCACCTCTCACTTCCCTCTTCATCTGGAACTTTCCAGAATTGCCCTCTCCCCACGTTCTTTCACAAAGGTACTACTTCGTTATCACTGCAATTCCTGGGTTAACTTTGTTTTTTTCCCTTGAATTTCAATGCCATTGCGGGTTAATTGATCGGGTATGTGCACGTCCTGATATTGATGATTTCTACTGGGAGAAAGTTCCAACGCCCATACTTGATACGATTGAGAATCCCCTTTGCTTGAAGAACTTATCTCTTAAGGAATTGAAACAATTAGCTGTTGAAATCCGTACTAGAGTTGTCTTCCATTATGTAGAGCTGACGGTTGTGATACACCATGTTTTTCATGCTCCAGTAGACAAGATATTGTGGGATGTTGGGGATGAAACATATGCACATAAGATTCTTACAGGAAGGCGATCCCTCATGAAGACAATGAGACAAAAGAATGGCCTTTCTGGTTTTACTTCCCGATTTGAGAGTGAATATGATGCATTTGGTGCAGGTCATGGATGCAACAGTATTTCTGCTGGACTTGGTAGTTTTGCAAATCCCTTGCATGGCAGTTGCACGGGATATGAAGGGGAAGGCGAGAGCGTGTAG 681 0.442 MWNYTPPLPPAPLSTTTRVLSLTNPIAPPLTSLFIWNFPELPSPHVLSQRYYFVITAIPGLTLFFSLEFQCHCGLIDRVCARPDIDDFYWEKVPTPILDTIENPLCLKNLSLKELKQLAVEIRTRVVFHYVELTVVIHHVFHAPVDKILWDVGDETYAHKILTGRRSLMKTMRQKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGSFANPLHGSCTGYEGEGESV* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0942 226 Pfam 1-deoxy-D-xylulose-5-phosphate synthase 98 207 IPR005477 GO:0008661|GO:0016114
Dod09g0942 226 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 110 207 IPR029061 -
Dod09g0942 226 Gene3D - 90 210 - -
Dod09g0942 226 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED 72 206 IPR005477 GO:0008661|GO:0016114
Dod09g0942 226 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-LIKE PROTEIN 72 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0942 Dod-Chr9 29305921 29308693 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0942 K01662 - gmx:100793268 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0942 09 29305921 29308693 Dod09g0942 09 29305921 29308693 ECH