Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0929 ATGAGTAGGCCAGGAGATTGGAACTGCAGGACATGCAATCACCTCAACTTCCAAAGAAGGGAATCGTGCCAACGGTGCGGGGAGCCAAGGGGTGCCAGCAGTGACTACGGCGGTGGCTTTGGTGGCAGAGGCTCTTCCTCCTTTGGCTTCACCACTGGCCCTGATGTCCGCCCTGGGGACTGGTACTGCACTGTCGGAAACTGTGGCGCCCACAACTTCGCCAGCCGCTCCAGCTGCTTCAAGTGCGGCGCCCCTAAGGAAGAGTCCTCCGCCGGAGGATACGACGCTGACATGCCCCGTATGAGAGCCTTCGGCTTTAGTGGTGGCAGCTCCGCTCGTCCCAGCTGGAAGTCTGGTGATTGGATATGTAACAGGTCTGGATGCAACGAGCACAACTTTGCTAATAGAATGGAGTGCTACCGATGCAATGCACCCAGGGACTCCAGTAGTGGCAGGTCTCCCTATTCATCGTAG 474 0.5781 MSRPGDWNCRTCNHLNFQRRESCQRCGEPRGASSDYGGGFGGRGSSSFGFTTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEESSAGGYDADMPRMRAFGFSGGSSARPSWKSGDWICNRSGCNEHNFANRMECYRCNAPRDSSSGRSPYSS* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0929 157 PANTHER RAN BP2/NZF ZINC FINGER-LIKE SUPERFAMILY PROTEIN 1 150 - -
Dod09g0929 157 SMART zf_4 59 85 IPR001876 -
Dod09g0929 157 SMART zf_4 119 145 IPR001876 -
Dod09g0929 157 SMART zf_4 5 29 IPR001876 -
Dod09g0929 157 ProSiteProfiles Zinc finger RanBP2 type profile. 117 148 IPR001876 -
Dod09g0929 157 SUPERFAMILY Ran binding protein zinc finger-like 111 149 IPR036443 -
Dod09g0929 157 SUPERFAMILY Ran binding protein zinc finger-like 2 32 IPR036443 -
Dod09g0929 157 Gene3D - 110 148 - -
Dod09g0929 157 Gene3D - 2 32 - -
Dod09g0929 157 Gene3D - 52 89 - -
Dod09g0929 157 ProSiteProfiles Zinc finger RanBP2 type profile. 57 88 IPR001876 -
Dod09g0929 157 ProSitePatterns Zinc finger RanBP2-type signature. 61 82 IPR001876 -
Dod09g0929 157 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Dod09g0929 157 Pfam Zn-finger in Ran binding protein and others 3 30 IPR001876 -
Dod09g0929 157 Pfam Zn-finger in Ran binding protein and others 57 87 IPR001876 -
Dod09g0929 157 Pfam Zn-finger in Ran binding protein and others 117 146 IPR001876 -
Dod09g0929 157 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Dod09g0929 157 ProSitePatterns Zinc finger RanBP2-type signature. 121 142 IPR001876 -
Dod09g0929 157 PANTHER ZINC FINGER PROTEIN 1 150 - -
Dod09g0929 157 SUPERFAMILY Ran binding protein zinc finger-like 53 89 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0929 Dod-Chr9 29133731 29135573 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0929 - - gmx:100811107 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0929 09 29133731 29135573 Dod09g0929 09 29133731 29135573 ECH