Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0925 ATGGAAGCAACCGCTGGAATGGTTGCTGGCTCTCACAAAAGGAACGAGCTTGTTCGGATTCGCCACGATTCTTCCGACAGTGGGTCTAAGCCCTTGAAGAATTTGAATGGCCAAATCTGCCAAATATGTGGTGATACTGTGGGGTTAACTGCCACTGGTGATGTCTTTGTTGCTTGCAATGAGTGTGCCTTCCCGGTTTGTCGTCCTTGTTATGAGTATGAGCGGAAGGATGGGAACCAATCTTGTCCTCAGTGCAAGACCAGATACAAGAGGCACAGAGGGAGTCCTCGAGTGGAGGGAGACGATGAAGAAGAAGATGTTGATGATCTAGAGAATGAGTTCAATTATAACCAAGGAAATGCCAAGGCGAAGCGCCAGTGGGAAGAAGATGCTGACCTCTCTTCGTCATCTAGGCGCGATCCTCAACAGCCAATTCCCCTTCTCACCAACGGCCAGCCGATGTCAGGTGAGATTCCTACTCCTGATACTCAATCTGTGAGGACTACATCAGGTCCTTTGGGCCCATCTGAAAAGGTTCACTCACTTCCCTATATTGATCCAAGACAACCAGTTCCAGTTAGAATTGTGGACCCATCCAAGGACTTGAATTCTTATGGTCTGGGAAATGTTGACTGGAAAGAAAGGGTTGAAGGTTGGAAACTCAAACAGGAGAAAAATATGGTGCAAATGACTGGTAGATACAATGAAGGAAAAGGAGGAGACATTGAAGGGACTGGTTCTAATGGAGAAGAACTTCAAATGGTTGATGATGCTAGACAGCCTTTGAGTCGTGTGGTGCCTATTCCTTCATCTCAGCTGACCCCTTATCGTGTGGTTATCATACTCCGGCTGATTATTCTTGGCTTCTTCTTACAATATCGTGTAACTCACCCTGTGAAAGATGCATACCCACTGTGGTTGACTTCAGTTATTTGTGAGATTTGGTTTGCTGCATCCTGGATCTTGGATCAGTTTCCTAAATGGTCTCCCATTAATCGTGAGACTTATCTTGATAGACTTGCTTTAAGATATGATCGTGAAGGAGAACCATCGCAGTTGGCTCCTGTTGATGTTTTTGTTAGTACAGTGGATCCCCTCAAAGAGCCCCCACTTATAACTGCAAACACTGTTTTGTCTATACTTGCTGTTGATTACCCTGTAGACAAGGTTTCCTGCTATGTATCAGACGATGGTTCAGCAATGTTGACATTTGAAGCCCTTTCAGAAACAGCTGAATTCGCAAAGAAGTGGGTGCCCTTTTGCAAAAAGCACAATATTGAGCCAAGAGCCCCTGAGTTTTATTTTGCCCAGAAGATTGATTACTTGAAGGACAAGATTCAACCTTCTTTTGTAAAGGAGCGGCGAGCAATGAAGAGAGAATATGAAGAATTCAAGGTAAGGATCAACGCCCTTGTAGCCAAAGCTCAGAAGGTGCCAGAAGAAGGTTGGACAATGCAGGATGGAACTCCTTGGCCTGGAAATAATCCTAGGGATCATCCTGGAATGATTCAGGTGTTTTTAGGTCATAGTGGAGGGCTTGATACAGATGGAAATGAGCTTCCCAGACTTGTTTATGTTTCTCGTGAGAAGCGACCAGGCTTCCAACATCACAAGAAGGCTGGAGCTATGAATGCTTTGATTCGAGTTTCTGCTGTCTTGACCAATGGTGCATATCTTTTGAATGTCGATTGTGACCACTACTTCAATAACAGCAAAGCTCTTAAAGAAGCCATGTGTTTCATGATGGATCCTGTTCTTGGAAGGAAAACATGCTATGTACAATTCCCCCAGAGGTTTGATGGCATTGACTTGCATGATCGATATGCCAATCGCAACATTGTGTTCTTTGATATCAACATGAAAGGTCAGGATGGTGTTCAAGGCCCAGTCTATGTGGGAACTGGATGCTGTTTCAATAGGCAGGCTTTGTATGGTTATGATCCTGTCTTGACTGAGGAGGATTTGGAGCCTAACATTATCGTGAAGAGTTGTTGGGGTTCTAGAAAGAAAGGAAGGGGAGGCAATAAGAAGTACAATGACAAGAAGAGGGGAATTAAAAGAACTGAATCCACAGTTCCCATCTTTAACATGGAAGACATAGAAGAGGGTGTTGAAGGGTATGACGATGAGAGGTCACTTCTTATGTCTCAAAAGAGCTTAGAGAAGCGTTTTGGTCAGTCTCCAGTTTTTATTGCTGCGACCTTCATGGAACAGGGTGGCATTCCACCATCAACCAACCCTGCAACTCTTCTTAAGGAAGCAATTCATGTTATCAGCTGTGGTTATGAAGACAAGACGGAATGGGGAAAAGAGATTGGATGGATCTATGGTTCTGTGACTGAAGATATCTTGACTGGGTTTAAGATGCATGCTCGTGGTTGGATTTCCATCTATTGCATGCCACCTCGTCCGGCATTCAAGGGTTCTGCTCCCATCAATCTTTCTGACCGTCTCAACCAGGTGCTTCGGTGGGCCTTGGGTTCTATTGAGATCTTTCTAAGCAGGCATTGTCCCCTGTGGTATGGATACAATGGGAGGTTGAAGCCTCTGATGAGACTTGCTTATGTTAACACCATTATCTACCCGCTAACCTCAATCCCACTGATTGCTTACTGTGTGCTTCCTGCGTTTTGTCTTCTCACCAATAAATTTATCATTCCTGAGATAAGCAACATAGCCAGCATGTGGTTCATTCTCCTTTTCGTCTCCATTTTTACTACTTCAATCCTTGAGCTTAGGTGGAGTGGGGTTAGCATAGAAGACTGGTGGAGGAACGAACAGTTCTGGGTTATTGGTGGTACATCCGCTCATCTTTTTGCCGTGTTCCAGGGGCTTCTAAAAGTGCTTGCTGGGATAGATACAAATTTTACTGTCACATCAAAGGCATCAGATGATGATGGGGATTTTGCTGAGCTTTATGTGTTCAAATGGACATCACTTCTCATCCCTCCTACAACAGTGCTCATTGTGAACTTGATAGGGATAGTGGCTGGTGTGTCCTATGCCATAAACAGTGGTTACCAGTCTTGGGGTCCTCTATTTGGCAGGCTCTTCTTTGCTATCTGGGTCATTGCACATCTATACCCATTCTTGAAGGGTCTCTTGGGCAGGCAAAACCGTACCCCAACCATTGTTATTGTTTGGTCCATTCTCCTTGCCTCTATATTCTCATTGCTTTGGGTGAGGATTGACCCCTTCACCAATAGCACCGGCAAATCAGCCAATGGTCAATGTGGCATAGACTGTTAG 3249 0.4472 MEATAGMVAGSHKRNELVRIRHDSSDSGSKPLKNLNGQICQICGDTVGLTATGDVFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHRGSPRVEGDDEEEDVDDLENEFNYNQGNAKAKRQWEEDADLSSSSRRDPQQPIPLLTNGQPMSGEIPTPDTQSVRTTSGPLGPSEKVHSLPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNMVQMTGRYNEGKGGDIEGTGSNGEELQMVDDARQPLSRVVPIPSSQLTPYRVVIILRLIILGFFLQYRVTHPVKDAYPLWLTSVICEIWFAASWILDQFPKWSPINRETYLDRLALRYDREGEPSQLAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAKKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKVPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPVLGRKTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGQDGVQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCWGSRKKGRGGNKKYNDKKRGIKRTESTVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRLKPLMRLAYVNTIIYPLTSIPLIAYCVLPAFCLLTNKFIIPEISNIASMWFILLFVSIFTTSILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSYAINSGYQSWGPLFGRLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTNSTGKSANGQCGIDC* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0925 1082 Pfam Zinc-binding RING-finger 30 107 IPR027934 -
Dod09g0925 1082 PANTHER CELLULOSE SYNTHASE 21 1082 - -
Dod09g0925 1082 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 514 656 IPR029044 -
Dod09g0925 1082 SUPERFAMILY RING/U-box 25 113 - -
Dod09g0925 1082 Coils Coil 454 474 - -
Dod09g0925 1082 ProSiteProfiles Zinc finger RING-type profile. 40 86 IPR001841 -
Dod09g0925 1082 CDD mRING-HC-C4C4_CesA_plant 38 88 - -
Dod09g0925 1082 SUPERFAMILY Nucleotide-diphospho-sugar transferases 374 656 IPR029044 -
Dod09g0925 1082 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 21 1082 - -
Dod09g0925 1082 Pfam Cellulose synthase 356 1071 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dod09g0925 1082 MobiDBLite consensus disorder prediction 75 185 - -
Dod09g0925 1082 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 113 IPR013083 -
Dod09g0925 1082 MobiDBLite consensus disorder prediction 137 175 - -
Dod09g0925 1082 MobiDBLite consensus disorder prediction 14 28 - -
Dod09g0925 1082 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0925 Dod-Chr9 29091185 29097743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0925 1 1080 Glycosyltransferase AT4G32410 86.611 0.0 1925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0925 K10999 - gmx:100798193 2122.44