Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0923 ATGAAGCATAATCGTAGGGTATCCTTGGCAGGAATTGAATACATCACCATGAGGCTCTTTTCCCTTGCAGTGATCTTGTCAAACCTATTGCTCATAAAAGTGAGCCTGGTTCATGGAGACGTTGGTACTGCAACTTCTTACGGACCCCCATACATACCTACTGCTTGTGATGGAAGTAGGCGACAGCAATTTCCTCCGGGAAATCTCTTTGTAGCTGTGAATGAAGGGTTGTGGGACAATGGGGCTGCCTGTGGAAGGCGTTACAGAATAAGGTGCGTGAGTGGAAACAATAGGCCTTGCAAAGGTGGCAACATTGACGTTAAAGTGGTTGATTTATGTGATAAGTCGCCATGCCCCAACACCTTTCTCATGTCAACAGATGCCTTTGCAGCCATCTCACGATTCCCTAATGCAAAAATTAATATTGAATATACCCAGATATGA 444 0.4482 MKHNRRVSLAGIEYITMRLFSLAVILSNLLLIKVSLVHGDVGTATSYGPPYIPTACDGSRRQQFPPGNLFVAVNEGLWDNGAACGRRYRIRCVSGNNRPCKGGNIDVKVVDLCDKSPCPNTFLMSTDAFAAISRFPNAKINIEYTQI* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0923 147 Pfam Lytic transglycolase 72 144 IPR009009 -
Dod09g0923 147 Gene3D - 40 147 IPR036908 -
Dod09g0923 147 SUPERFAMILY Barwin-like endoglucanases 30 147 IPR036908 -
Dod09g0923 147 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 18 146 - -
Dod09g0923 147 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 42 147 IPR007112 -
Dod09g0923 147 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 18 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0923 Dod-Chr9 29064525 29065505 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0923 - - gmx:100792215 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0923 09 29064525 29065505 Dod09g0923 09 29064525 29065505 ECH