Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0900 ATGGCTCCGAGCACGATTCGGAAGGCGATGGGGGTGATGAAGGACCAGACGAGCATAGGGATAGCGAAGGTGGCGAGCAACATGGCGCCGGACCTCGAGGTGGCGATCGTGAAGGCCACCAGCCACGACGACGATCCCGCCGGAGAGAAGTACGTACGCGAGATCCTGAACCTCATGTCGTACTCGCGCGGCTACGTCCACGCCTGCGTCTCCGCCGTGTCGAAGCGCCTTGGGAAGACGCGCGACTGGATCGTGGCTCTCAAGGCGCTCATACTTGTCCACCGCCTCATGAACGAAGGTCCGCCGATGTTCCAGGAGGAGATCCTCTACGCCACGCGCAGGGGAACCAGGCTCCTCAACATGTCAGATTTCAGGGACGAGGCTCATTCAAGCTCGTGGGATCACTCAGCTTTCGTTAGGACCTACGCTATGTACCTCGATCAGCGCCTTGAGCTGATGCTTTTTGATAGGAAGAGTAGCAGCGTTGGTGCTGGTGGTGGTGGTGCTGCTGGAAGTGTTGGTGGCGGCGGCGGCGGCGGCGGCAGCAGTTACGATGATAGATTTGGCGGGAGGGACAATTTCCGGTCACCGCCGCCGCGGCCTTATGAGTATGAGTACGGAGGAGAGTTCAGAGGGGAAGGAGGGTACGGTAGCGGGATGAGGAGGACGAGGTCGTTTGGTGACATGGCTGAGAGAGAAACGGTTGGTAGGGATGACAAGAGGATTATTAGTGTTACTCCGTTGAGGGATATGACTCCAGAGAGGATTTTCGGGAAGATGGCGCATTTGCAGAGGCTGTTGGATCGGTTCTTGGCTTGCAGGCCTACTGGTTTGGCAAAGAATAGCAGGATGATTCTGATTGCGTTGTACCCTGTGGTCAAGGAGAGCTTTCAGCTTTATGCTGATATTTGTGAGGCTCTGGCTGTGCTGCTTGACAAGTTCTTTGATATGGAGTACCCTGATTGTGTTAAGGCCTTTGATGCTTACGCCAGTGCGGCGAAGCAGATTGATGAGCTTGTTGCGTTCTACAATTGGTGTAAGGATACGGGGGTAGCGAGGTCTTCGGAGTACCCTGAGGTTCAGAGGATCACTAGTAAGTTGCTTGAGACGCTGGAGGAGTTTGTGAGGGATAGGGCCAAGAGGCCCAAGAGTCCCGAGAGGAAAGTGGAGGCTCTGCCCCCTCCGGTTAATGAAGAGGAGGAGCCCGTGCCGGATATGAATGAGATCAAGGCGCTGCCTCCACCGGAGAATTATACCCTGCCGCCTGAGCCTGAGCCGGAGCCTGAGCCGCACCAGCCGCAGTTTACAGAGGACTTGGTGAATCTGAGGGACGATGCAGTCAGTGCTGATGATCAGGGTAATAGATTGGCTTTGGCACTCTTTGCTGGTGCGCCCGGTAACAATGCGAATGGGTCATGGGAAGCATTCCCATCAAATGGACAGCCAGAAGTGACTTCGGCCTGGCAAACCCCAGCCGCAGAGCCCGGGAAGGCCGACTGGGAATTGGCCTTGGTAGAGACTGCTAGCAACTTGTCAAGGCAGAAGCAAACTCTTGGTGGTGGGCTTGATCCCTTGTTGTTGAATGGCATGTATGATCAAGGAATGGTGAGGCAGCATGTCAGCACTGCCCAATTGAGTGGAGGGAGTGCAAGCAGCGTGGCATTGCCAGGACCAGGAAAGACCACAACCCCTGTTTTGGCACTTCCAGCCCCTGATGGGTCCGTTCAACCAGTTAACCAGGACCCATTTGCTGCATCATTGAGCTTTCCACCACCATCCTATGTGCAAATGGCTGATATGGAGAAGAAGCAGCAGTTGCTTGTGCAGGAGCAGGTTCTGTGGCAGCAGTATCAGAGGGATGGCATGCAAGGCCAATCTAGCTTGACCAAACTGAGTGGCACTGGATACTATGCTGGAGCTCCCATGCCAATGATGCCTTATGGAATGCCCCCTGTCAATGGAATGGGACCTCCTCCGACAGGGTATTATCATACTCCTTACTGA 2004 0.5514 MAPSTIRKAMGVMKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPAGEKYVREILNLMSYSRGYVHACVSAVSKRLGKTRDWIVALKALILVHRLMNEGPPMFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLFDRKSSSVGAGGGGAAGSVGGGGGGGGSSYDDRFGGRDNFRSPPPRPYEYEYGGEFRGEGGYGSGMRRTRSFGDMAERETVGRDDKRIISVTPLRDMTPERIFGKMAHLQRLLDRFLACRPTGLAKNSRMILIALYPVVKESFQLYADICEALAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKVEALPPPVNEEEEPVPDMNEIKALPPPENYTLPPEPEPEPEPHQPQFTEDLVNLRDDAVSADDQGNRLALALFAGAPGNNANGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSRQKQTLGGGLDPLLLNGMYDQGMVRQHVSTAQLSGGSASSVALPGPGKTTTPVLALPAPDGSVQPVNQDPFAASLSFPPPSYVQMADMEKKQQLLVQEQVLWQQYQRDGMQGQSSLTKLSGTGYYAGAPMPMMPYGMPPVNGMGPPPTGYYHTPY* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0900 667 MobiDBLite consensus disorder prediction 165 201 - -
Dod09g0900 667 Gene3D - 2 156 IPR008942 -
Dod09g0900 667 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Dod09g0900 667 MobiDBLite consensus disorder prediction 415 429 - -
Dod09g0900 667 SMART enth_2 30 160 IPR013809 -
Dod09g0900 667 MobiDBLite consensus disorder prediction 378 434 - -
Dod09g0900 667 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 642 IPR045192 GO:0048268|GO:0072583
Dod09g0900 667 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Dod09g0900 667 SUPERFAMILY GAT-like domain 247 377 - -
Dod09g0900 667 PANTHER - 5 642 - -
Dod09g0900 667 Pfam ANTH domain 31 152 IPR011417 GO:0005543
Dod09g0900 667 Pfam ANTH domain 222 377 IPR011417 GO:0005543
Dod09g0900 667 Gene3D ANTH domain 240 390 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Dod09g0900 667 MobiDBLite consensus disorder prediction 378 395 - -
Dod09g0900 667 CDD ANTH_N_AP180_plant 32 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0900 Dod-Chr9 28730241 28733253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0900 - - adu:107463239 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0900 09 28730241 28733253 Dod09g0900 09 28730241 28733253 ECH