Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0863 ATGGGGAAGCCCACAGGCAAGAAGAAGCATCAGCAGCAGCCTCCCGCGACTTTGCGGCCCGGGCCGAACCCCAGCTCCAGGCCCACCAAGCCCAAAGCCTTCGACGAAGACACAGCCATGTTCATCACCATGTCCCAGGAGCTCAGGGAAGAAGGCAACCTGCTCTTCCAGAAGAAAGACCACGAGGGCGCCATGTTGAATTACGAAAAAGCCCTCAAGCTCCTTCCCCGCAACCACATCGACATGGCAAACCTCCGCACCAGCATAGCCCACTGCTACATGCAGTTGGGCCTCGGCGAGTACCCACGCGCCATCCAGCAGTGCAATCTTGCACTCGAGGTGTCCCCCAAGTACACCAGGGCTCTGTTGAGGAGGGCCAAGTGCTACGAGGCGCTGAACCGCTTGGACTTGTCCCTCAGCGATGTTCGGGCCGTTTTGGGCCTCGAGCCCAATAACCTCGTCGCGTTGGAGTTCTTTGAAGTGTTGAGGAAGGTGATGGAAGAGAATGGGATCACTTTTGATGATGAGGAGAAGGGTGAGGAGGGTGGTTTTAATGGTAGAAAGGATAAGGAGGCACCTGCACCTGCCACGTGTTCGAAGAAAGTTGTGAGAGAGAAAGTGAAGAAGAAGAAGGGGAAGAGGGTGGAGGAGGATAAGGAGGTGGAAAAGGCTGTTGTTGTTGAGGAGAGTTTGGGTGACGTGAAGGACAAGGAAGTGGTTGCGAGGGCGGTTGAGGAGGAGAAGCTTGTGGAGCAAGAAAAGGCTGTTGTGGATGCCTTGAAGGACAAGGAAGTGGTTGGGAAGGCAGCTGAGGAAGAGAAATTTGTGGATGAAGGGGAGGGCTTCGCGAGAACGGTGAAGTTGGTGTTTGGAGAGGACATAAGGTGGGCGCAGTTGCCAGCGAATTGTAGCGTGAGGTTGGTGTGGGATGTTGTGAAGGATAGGTTTCCAGGGTTGAAGGGTGTGCTGGTGAAGTATAGGGATGAGGAAGGTGATCTGATTACGATCACTACTACTGATGAGCTGAGGTGGGCTGAATCTTGTGGCCAGGAGAATCGATCGTTTAGGCTTTATATTTCGGAGGTCAATTCGGACCAAGAACCTCGTTATGATGGAGTAAGCGATGAGGGCGAGGAGCCAGGAGATGGTAGGAAAAGGAAACCGGGTGATGGTATTAAGAATGGGGTGCTGGGAGAAGATAAAGATGGAGATGGTCAGATGACCACTGTGGAGGATTGGATTGTCCGGTTTGCGAGGCTGTTCAAGAACCATGTTGGGTTTGATTCTGATTCTTATCTAGATAGTCATGAGCTTGCGATGAAGATATATGCAGAGGCAGTGGAGGATGCTGTAACAGGTGATGATGCTCAAGAGCTCTTTGAAATTGCTGCAGACAAATTTCAAGAGATGGCAGCATTGGCGTTACTTAATTGGGGGAGTGTTCACATGTCCAGGGCAAGGAACCGGGGTTTCTTTGCGGAGGATGGGTCGAGAGAACCTTCGTTCGAGCATATCAAAGCTGCGAATGAGTGGGCGCAAGAGGAGTACAGGAAAGCAGAAATGAAGTATGAAGAAGCCTTGAAGATGAAGCCAGACTTCTATGAAGGATATCTTGCTCTTGGGCACCAGCAGTTTGAGCAAGCAAGGTTGTACTGGTGTTATGCATTGGCATGCAAGATGGATTTAGGATCTGGCCCTTCTGATGAGGTTCTACAGCTCTATAACAAGGCAGAGGACAGCATGGAGAAAGGCATCATGATGTGGGAGGAGATTGAGGAGCAGCGTTTAAATGGACTATCCAAATCCGATAAATACAGACCACAGTTAGAGAAAATGGGCTTGGATAGACTTTTCAAGGATATCTCATCTGATGAAGCTTCAGAGAAGGCAGAGAAGATGAAGTGGCAGATACATCTTTTATGGGGTACATTATTGTATGAACGTTCTGTGGTGGAATTTAAACTTGGCCTACCAACATGGGGGGAATGTTTGGAGGTTGCTGTTGAGAAGTTTGAGCTAGCTGGAGCTTCTGCAACGGATATTGCTGTCATTGTAAAGAATCATTGCTCTAACGAAACAGCACTTGAAGGGTTCAAAATTGATGAGATAGTACAGGCGTGGAATGAGATGTATGATGCTCAAGGGTGGCTATTCCGGGATCCATCATTTCGTCTTGAGCCATTGTTTCGTCGGCGGGTTCCTAAACTCCATTACATCTTGGAGCAATTTTAA 2232 0.4964 MGKPTGKKKHQQQPPATLRPGPNPSSRPTKPKAFDEDTAMFITMSQELREEGNLLFQKKDHEGAMLNYEKALKLLPRNHIDMANLRTSIAHCYMQLGLGEYPRAIQQCNLALEVSPKYTRALLRRAKCYEALNRLDLSLSDVRAVLGLEPNNLVALEFFEVLRKVMEENGITFDDEEKGEEGGFNGRKDKEAPAPATCSKKVVREKVKKKKGKRVEEDKEVEKAVVVEESLGDVKDKEVVARAVEEEKLVEQEKAVVDALKDKEVVGKAAEEEKFVDEGEGFARTVKLVFGEDIRWAQLPANCSVRLVWDVVKDRFPGLKGVLVKYRDEEGDLITITTTDELRWAESCGQENRSFRLYISEVNSDQEPRYDGVSDEGEEPGDGRKRKPGDGIKNGVLGEDKDGDGQMTTVEDWIVRFARLFKNHVGFDSDSYLDSHELAMKIYAEAVEDAVTGDDAQELFEIAADKFQEMAALALLNWGSVHMSRARNRGFFAEDGSREPSFEHIKAANEWAQEEYRKAEMKYEEALKMKPDFYEGYLALGHQQFEQARLYWCYALACKMDLGSGPSDEVLQLYNKAEDSMEKGIMMWEEIEEQRLNGLSKSDKYRPQLEKMGLDRLFKDISSDEASEKAEKMKWQIHLLWGTLLYERSVVEFKLGLPTWGECLEVAVEKFELAGASATDIAVIVKNHCSNETALEGFKIDEIVQAWNEMYDAQGWLFRDPSFRLEPLFRRRVPKLHYILEQF* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0863 743 MobiDBLite consensus disorder prediction 1 35 - -
Dod09g0863 743 Gene3D Tetratricopeptide repeat domain 38 183 IPR011990 GO:0005515
Dod09g0863 743 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Dod09g0863 743 Coils Coil 243 263 - -
Dod09g0863 743 PANTHER PROTEIN PHOX4 1 742 - -
Dod09g0863 743 SUPERFAMILY TPR-like 46 549 IPR011990 GO:0005515
Dod09g0863 743 MobiDBLite consensus disorder prediction 368 403 - -
Dod09g0863 743 SMART PB1_new 283 362 IPR000270 GO:0005515
Dod09g0863 743 MobiDBLite consensus disorder prediction 175 196 - -
Dod09g0863 743 SMART tpr_5 500 533 IPR019734 GO:0005515
Dod09g0863 743 SMART tpr_5 83 118 IPR019734 GO:0005515
Dod09g0863 743 SMART tpr_5 119 152 IPR019734 GO:0005515
Dod09g0863 743 SMART tpr_5 45 78 IPR019734 GO:0005515
Dod09g0863 743 Pfam Tetratricopeptide repeat 52 74 IPR019734 GO:0005515
Dod09g0863 743 Coils Coil 509 529 - -
Dod09g0863 743 MobiDBLite consensus disorder prediction 366 403 - -
Dod09g0863 743 Pfam PB1 domain 284 359 IPR000270 GO:0005515
Dod09g0863 743 Gene3D Tetratricopeptide repeat domain 434 634 IPR011990 GO:0005515
Dod09g0863 743 Gene3D - 284 362 - -
Dod09g0863 743 CDD PB1 285 360 - -
Dod09g0863 743 PANTHER PROTEIN CLMP1 1 742 IPR044517 -
Dod09g0863 743 ProSiteProfiles PB1 domain profile. 283 362 IPR000270 GO:0005515
Dod09g0863 743 SUPERFAMILY CAD & PB1 domains 280 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0863 Dod-Chr9 28122401 28127402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0863 33 152 Calmodulin-binding Proteins AT3G25230 28.682 1.23e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0863 - - gmx:100805760 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1705 08 40572376 40577201 Dod09g0863 09 28122401 28127402 PCT