Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0834 ATGGCCATGTCTCTTCGTTTTCATCCCCACCCATCATCCTCCATCTCTCTCTCTTCTCTTAGGATGGCAAGGAAAGTTCTAGGGAGTATCATAACAGATTTTTTTCAGCCAAGGATTGGAAATTGGCACTTAGCCAGAGGAGGTGGAAGACTAGTATCATTCAAGGGCTGTGTGAAGTTTGTGCAAACAAATTGCCGAATCTCTGTCCCTGGTACCTCACCAAGAAATGAAGAAAAACCCCCATCTAATAGCTTCAGTGATAAGAAGGCAGTTCCTGATGCGGATCCTCCCAGTATCAAAGATGTTAACCTTTTGTATCAATTTTTTGACCAAAGTTCAAAGCTCATGGTATTGACTGGAGCTGGAATTAGCACGGAGTGTGGGATCCCTGACTATAGAAGCCCCAATGGAGCTTATAGTTCTGGTTTCAAACCAATAACCCATCAGGAGTTTCTCCGTTCAAGTCGAGCCCGGAGGCGATATTGGGCAAGGAGCTATGCTGGGTGGAGGAGATTTACAGCAGCACAACCTGGAGCTGCCCATCGTGCTTTGGCAGCATTTGAGAAGGCTGGCCGCATTGATTTTATGATTACCCAAAATGTTGACAGGCTCCATCATCGTGCTGGTAGCAACCCATTAGAGTTACATGGCACTGTATACACCGTAATTTGTATAGATTGTGGACATTCCTTTTCCCGGAGCTTGTTCCAAGACCAGTTGAAGGAGCTTAACCCAAAGTGGGCAGAAGCAATTGAAAATTTGGACCATGGAAACCCTGGATCAGATAAGAGCTTTGGCATGAAACAAAGACCCGATGGTGATATTGAGATTGATGAAAGATTTTGGGAGGAAGATTTTATCATCCCAACTTGTCAAAAGTGCAATGGAGTCCTCAAACCTGATGTTATCTTCTTTGGTGATAATGTTCCCAAGGACAGAGCTGATATGGCAATGGAAGCATCTAGAAGATGTGATGCTTTTCTTGTACTAGGATCATCTCTGATGACCATGTCTGCTTTTCGACTTGTCAGGGCAGCTCATGAAGCTGGTGCTGCCACTGCAATTGTAAATGTAGGTGTGACACGTGCTGATGATCTTGTATCCTTGAAAATCAATGCACGGTTGGGTGAGATTCTTCCAAGAGTACTTGACATGGGATCCATAAGTGTACCTGCTGTTTAG 1182 0.445 MAMSLRFHPHPSSSISLSSLRMARKVLGSIITDFFQPRIGNWHLARGGGRLVSFKGCVKFVQTNCRISVPGTSPRNEEKPPSNSFSDKKAVPDADPPSIKDVNLLYQFFDQSSKLMVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQEFLRSSRARRRYWARSYAGWRRFTAAQPGAAHRALAAFEKAGRIDFMITQNVDRLHHRAGSNPLELHGTVYTVICIDCGHSFSRSLFQDQLKELNPKWAEAIENLDHGNPGSDKSFGMKQRPDGDIEIDERFWEEDFIIPTCQKCNGVLKPDVIFFGDNVPKDRADMAMEASRRCDAFLVLGSSLMTMSAFRLVRAAHEAGAATAIVNVGVTRADDLVSLKINARLGEILPRVLDMGSISVPAV* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0834 393 SUPERFAMILY DHS-like NAD/FAD-binding domain 88 385 IPR029035 -
Dod09g0834 393 CDD SIRT4 105 379 - -
Dod09g0834 393 MobiDBLite consensus disorder prediction 69 94 - -
Dod09g0834 393 Gene3D SIR2/SIRT2 'Small Domain' 130 308 IPR026591 -
Dod09g0834 393 Gene3D - 111 377 - -
Dod09g0834 393 ProSiteProfiles Sirtuin catalytic domain profile. 103 391 IPR026590 -
Dod09g0834 393 PANTHER NAD-DEPENDENT PROTEIN LIPOAMIDASE SIRTUIN-4 76 384 - -
Dod09g0834 393 Hamap NAD-dependent protein deacetylase [cobB]. 96 382 IPR026587 GO:0034979|GO:0051287
Dod09g0834 393 Pfam Sir2 family 120 335 IPR003000 GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0834 Dod-Chr9 26505711 26512139 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0834 K11414 - gmx:100815194 657.136