Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0820 ATGAGGGCAGGGAAGCTAGCGGGATTGTTGATGCTGCTCTTGTTGAGCTGCTCCACTTGTTCAGCTTGGTTTGGTAGTAGTAGTAAACACAAAAGAAGTTCCAATGGAAATAATAATGGAAGGAATTCTGTTCTTCAAGATGAACCCTCCTCCTCCTACTACTCATCTTCATCTTCATATTCATCGCCATCATTCATTAACCGCTATCGTGCTAGCTCGTCCATCATCTTCCCGGTTTATGGCAACGTTTATCCGGTTGGGTTTTATAATGTAACCCTCAACATAGGCCAGCCGCCGAGGCCGTATTTTCTTGATATAGACACGGGTAGCGACCTCACATGGCTTCAATGTGATGCCCCTTGTTCTCATTGCTCTCAGACACCCCATCCGCTTTACCGGCCAAGCAACGAGTTGGTAGCATGCAGGGACCCCATGTGTGCATCCTTGCACCAGAATGAAGACTACGACTGTGATGAACAGCCACATCAATGTGACTACGAAGTTGAGTATGCGGATCATTACTCATCCCTTGGAGTACTTGTCAATGATGTCTACATTCTCAACTTCACCAATGGAGTCCAACTTAGAGTTCGCATGGCACTTGGATGTGGATATGATCAAATATTTCAGGATCATTCTTACCACCCTCTGGATGGAATGCTTGGCCTTGGCAGGGGAAGATCCAGCTTGGTATCACAGCTGAATAGTCAGGGTTTGGTGAGAAATGTGGTTGGTCACTGCTTGAGTGCACATGGAGGAGGATACATCTTCTTTGGGGATGTTTTTGATTCTTCTAGACTGACTTGGACCCCAATGTCATCCACAAACTACAAACATTACTCAGCAGGGCCAGCTGAGCTCATTCTTGGAGGGAAGAGGATTGGGGTTGGAAGCCTTTATGCTGTTTTTGACACTGGGAGTTCTTACACTTACTTCAACTCCATGGCTTACCAAGCTGTAACTTCTTGGTTGAAGAAGGAAATAGCTGGAAAGTCCATAAAAGAAGAACCTAATGACCGAACTCTTCCTCTATGTTGGCGTGGGAGAAGACCTTTCAGAAGCATATATGAAGTCAGAAAATACTTCAAGCCTATGGCGCTTAGTTTCACCAGCAGCAACGGCAGAAGCAAAGCTCAGTTCGAAATCCCTCCCGAAGCTTATCTCATAATATCAAACATGGGAAATGTTTGCTTGGGCATCCTAAACGGCACTCAAGTAGGGATGGGGGATTTGAACTTAATTGGAGACATTTCCATGCTAGACAAAGTGATGGTATTTGACAATGAGAAGCTGTTGATTGGTTGGGCAACGACAGACTGTGACCGGGTTCCAAAATCAAGAAATGCCAGTATTTGA 1356 0.4528 MRAGKLAGLLMLLLLSCSTCSAWFGSSSKHKRSSNGNNNGRNSVLQDEPSSSYYSSSSSYSSPSFINRYRASSSIIFPVYGNVYPVGFYNVTLNIGQPPRPYFLDIDTGSDLTWLQCDAPCSHCSQTPHPLYRPSNELVACRDPMCASLHQNEDYDCDEQPHQCDYEVEYADHYSSLGVLVNDVYILNFTNGVQLRVRMALGCGYDQIFQDHSYHPLDGMLGLGRGRSSLVSQLNSQGLVRNVVGHCLSAHGGGYIFFGDVFDSSRLTWTPMSSTNYKHYSAGPAELILGGKRIGVGSLYAVFDTGSSYTYFNSMAYQAVTSWLKKEIAGKSIKEEPNDRTLPLCWRGRRPFRSIYEVRKYFKPMALSFTSSNGRSKAQFEIPPEAYLIISNMGNVCLGILNGTQVGMGDLNLIGDISMLDKVMVFDNEKLLIGWATTDCDRVPKSRNASI* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0820 451 Pfam Xylanase inhibitor C-terminal 298 435 IPR032799 -
Dod09g0820 451 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 445 - -
Dod09g0820 451 SUPERFAMILY Acid proteases 80 443 IPR021109 -
Dod09g0820 451 ProSiteProfiles Peptidase family A1 domain profile. 89 436 IPR033121 -
Dod09g0820 451 MobiDBLite consensus disorder prediction 27 62 - -
Dod09g0820 451 Pfam Xylanase inhibitor N-terminal 89 260 IPR032861 -
Dod09g0820 451 Gene3D Acid Proteases 260 444 IPR021109 -
Dod09g0820 451 PANTHER ASPARTYL PROTEASES 10 445 IPR001461 GO:0004190|GO:0006508
Dod09g0820 451 Gene3D Acid Proteases 65 259 IPR021109 -
Dod09g0820 451 PRINTS Pepsin (A1) aspartic protease family signature 412 427 IPR001461 GO:0004190|GO:0006508
Dod09g0820 451 PRINTS Pepsin (A1) aspartic protease family signature 301 312 IPR001461 GO:0004190|GO:0006508
Dod09g0820 451 PRINTS Pepsin (A1) aspartic protease family signature 95 115 IPR001461 GO:0004190|GO:0006508
Dod09g0820 451 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0820 Dod-Chr9 26106511 26109438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0820 71 446 Miscellaneous Gene Families AT1G44130 48.684 6.95e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0820 - - adu:107463231 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0820 09 26106511 26109438 Dod09g0820 09 26106511 26109438 ECH