Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0535 ATGATTAGCATCCCACTATACCATAGTGCAATGCTCAATGGCACTATCAAGGTCTCTAGAGGAGTTTATTACCCTCAAATGGACCCAATGGTAGATGTATACCCTATTGATGATGCTTATGCAATTTTCTTGTGGATTGGTACGCCAGTGCAAATTGTATTTGTTCTCATGGACACAGGGAGCCCCATCACATGGTCACAGTGTGACCCTTGCAGTAGCTGTTACCCCATGCAACGCCCTCCTCTCAATACAAGAGCATCAAGCACCTTTAGAGAACTTGGTTGTTACACTGACACATGCTTGATTCCAATGATGAGGGAACTTCTTGGTAACTGCACTGATTGGACTTGTAGGTACAATGTGAAGTATGCTAAGGAATCTCGATCCTTTGGAACTATGGTCACTGACACTCTGAATTTTGAGCATTCCAACACTGAGGTGAAGAACTTCATAATGGGGTGTGGAGATTCATATGAGGGTCCACTTAGGACTGAATTCTCAGGAGTTTTTGGTCTAGGACGTGGTCCTCTTTCAGTGCAAAGCCAACTCAATGCAAAGGCCTTTTCTTTTTGCCTTGTAAGCCCTGGATCAAAAACGCCCTCTAGTCTTCAATTTTATGACACCCCACCTCCAATGAATCAAAATGGTACTCTTTTTAACAATAATTCCATTATGATTCCATTGAGAGAGAATAGTGGATACCCTTTTTACTATTTTGTGCAATTTGTTGGTATAAGCATTAATGGGTTTATGCTAGATATTCAATCTAGAGTTTGGGGATATGGTCTAAATTATGATGGTGGGGTTGTTTTAGATATTGGAACAACTGCAACATATTTGCCAAGGGAAGCATACAGTGTGTTCAAGTCAGAGATACTCAAAGTTGATCATAACCTTACTAGGAAGCAAGGGCATGAGGAGCTAGAGCTTTGTTATAAAGATGATCCATCAAATGTGTATCCAACCATTGAATTACACTTTCAAAATGGCGATATTGCAGGCGAAAATTTTGTGTCCTTAAAGTTGAACAATAACCAAACACTGTTTAGAGTTGAAGAAGGCACGGTTTGTCTATCATTTGTAGAAGGAAAAGGCTCCGGATCTAACGGTGATTGGCAGTAA 1122 0.4055 MISIPLYHSAMLNGTIKVSRGVYYPQMDPMVDVYPIDDAYAIFLWIGTPVQIVFVLMDTGSPITWSQCDPCSSCYPMQRPPLNTRASSTFRELGCYTDTCLIPMMRELLGNCTDWTCRYNVKYAKESRSFGTMVTDTLNFEHSNTEVKNFIMGCGDSYEGPLRTEFSGVFGLGRGPLSVQSQLNAKAFSFCLVSPGSKTPSSLQFYDTPPPMNQNGTLFNNNSIMIPLRENSGYPFYYFVQFVGISINGFMLDIQSRVWGYGLNYDGGVVLDIGTTATYLPREAYSVFKSEILKVDHNLTRKQGHEELELCYKDDPSNVYPTIELHFQNGDIAGENFVSLKLNNNQTLFRVEEGTVCLSFVEGKGSGSNGDWQ* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0535 373 ProSiteProfiles Peptidase family A1 domain profile. 40 373 IPR033121 -
Dod09g0535 373 CDD pepsin_A_like_plant 39 373 IPR034161 -
Dod09g0535 373 Gene3D Acid Proteases 27 205 IPR021109 -
Dod09g0535 373 SUPERFAMILY Acid proteases 36 367 IPR021109 -
Dod09g0535 373 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 37 364 - -
Dod09g0535 373 Gene3D Acid Proteases 212 373 IPR021109 -
Dod09g0535 373 Pfam Xylanase inhibitor N-terminal 40 204 IPR032861 -
Dod09g0535 373 PANTHER OS07G0603500 PROTEIN-RELATED 37 364 - -
Dod09g0535 373 Pfam Xylanase inhibitor C-terminal 238 365 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0535 Dod-Chr9 8382738 8383859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0535 32 370 Miscellaneous Gene Families AT1G77480 25.137 9.19e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0535 - K22683 aprc:113874191 587.8