Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0520 ATGTCATCGTGCGCCATCTTCACTTCACTCCTTGCCCCCTCCCTCCCTTCCCTCCCTCCCTTTTCCCATTCTCATTCTCATTTCCTTCCTTCCTTCAACACTCAGCAGGCACCACTACCAGTGCCAGGGCAGGGCAGGGCAGTGTGCAAGTCACACATCACGCGCGCGCACACACAAAAATGTCGTACCTTGTTCTGCCCAGTCCTCACTTCACTTCCATCATTCACCGCTCCAACAACACCTTATCCTCCTCTGCTTCTTTTCTTCCTCGTCCTCTTCCTCAATCGCATTGCCAATTCCATCTTTCCTTTTCTCCCTATTCCCCAACCGCTCCCTTTCGCACGCACTCCCCTTCGCGCCTTCGATTCCGGTTCTTCTTCCGGCCCCAAAAGCCAAGAAAAAGAAGAACAACAAGAAGAAGAAGGTGCCGTTAACATTAACAACGAGAGTGTAGTTGGTGCTGGGGTTTCCGAGGAGGATTATCCGAGTGGGGAATTTGAATATGAAGCCATTACGGGACTGAGAAGCTTCCTCGTCAAGCTTAAGATGCTTGTTGCCTTCCCCTGGGAGCGTGTCCGCAAGGGAAGCGTCCTCACTATCAAGCTTCGTGGCCAGATATCCGATCAAGTGAAGACTAGGTTCTCTCCTGGACTTTCTCTGCCTCAAATTTGTGAGAATTTTTTGAAAGCAGCTTATGATCCTCGTATATCTGGGATATATCTCCATATTGATAGTTTGAATTGTGGGTGGGGGAAAGTTGAAGAAATTCGAAGGCACATATTGAATTTCAAACAATCAGGAAAATTTGTTGTGGCATATGTCCCTACATGTCAGGAAAAAGAATATTACCTTGCATGTGCATGTGAAGAGATATATGCCCCTCCAAGTGCTTACTTTTCTTTGTTTGGATTGACCGTTCAAGCCTCATTCCTCAGAGGGGTTTTAGATAACATAGGAATTGAACCACAAGTGGAAAGAATTGGCAAATACAAAAGTGCAGGAGATCAACTAGCACGAAGAACCATGTCTGAAGAAAATTGTGAAATGCTTACTTCATTGCTTGATAACATCTATACAAATTGGCTGGATAAAGTCTCTTCTGCCAAAGGAAAGAAAAGAGAAGATGTTGAGAACTTCATAAATGAAGGCATTTATCAAGTAGACAAGCTGAAAGAAGAGGGCTTCATATCGAACATAATCTATGATGATGAGGTTATTTCCATGTTGAAGGAGAGACTTGGAGTGAAAAAAGACAAAAATCTGCCTATGGTGGATTACAGGAAATACTCTCGAGTTAGGAAATGGACAGTTGGAATATCAGGTGGTAAAGATCTGATAGCCATCATCCGAGGGTCAGGGAGCATTAGTCGCATTGAGAGTCAATTAAGTGTGTCTAGCTCAGGAATCATTGCAGAGAAGTTCATTGAGAAGATTCGCAGTGTCAGAGAGTCAAAAAAATTTAAGGCTGCTATCATCCGAATTGATAGTCCTGGAGGTGATGCTCTTGCTTCTGATTTAATGTGGAGAGAAATCCGTCTTTTGGCCGCTTCAAAACCAGTCATTGCTTCGATGGCTGACGTGGCAGCAAGTGGAGGGTACTACATGGCAATGGGAGCTCAGGCTATTGTTGCAGGAAAGCCTTACCTTAACTGGTTCAATTGGAGTTGTCACAGGAAAATTTAA 1683 0.445 MSSCAIFTSLLAPSLPSLPPFSHSHSHFLPSFNTQQAPLPVPGQGRAVCKSHITRAHTQKCRTLFCPVLTSLPSFTAPTTPYPPLLLFFLVLFLNRIANSIFPFLPIPQPLPFARTPLRAFDSGSSSGPKSQEKEEQQEEEGAVNINNESVVGAGVSEEDYPSGEFEYEAITGLRSFLVKLKMLVAFPWERVRKGSVLTIKLRGQISDQVKTRFSPGLSLPQICENFLKAAYDPRISGIYLHIDSLNCGWGKVEEIRRHILNFKQSGKFVVAYVPTCQEKEYYLACACEEIYAPPSAYFSLFGLTVQASFLRGVLDNIGIEPQVERIGKYKSAGDQLARRTMSEENCEMLTSLLDNIYTNWLDKVSSAKGKKREDVENFINEGIYQVDKLKEEGFISNIIYDDEVISMLKERLGVKKDKNLPMVDYRKYSRVRKWTVGISGGKDLIAIIRGSGSISRIESQLSVSSSGIIAEKFIEKIRSVRESKKFKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMADVAASGGYYMAMGAQAIVAGKPYLNWFNWSCHRKI* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0520 560 SUPERFAMILY ClpP/crotonase 446 544 IPR029045 -
Dod09g0520 560 Pfam Peptidase family S49 263 415 IPR002142 GO:0006508|GO:0008233
Dod09g0520 560 Pfam Peptidase family S49 514 544 IPR002142 GO:0006508|GO:0008233
Dod09g0520 560 MobiDBLite consensus disorder prediction 121 144 - -
Dod09g0520 560 CDD S49_Sppa_N_C 446 544 IPR002142 GO:0006508|GO:0008233
Dod09g0520 560 SUPERFAMILY ClpP/crotonase 183 401 IPR029045 -
Dod09g0520 560 PANTHER PROTEASE 4 139 544 - -
Dod09g0520 560 Gene3D - 441 548 - -
Dod09g0520 560 Gene3D - 195 337 - -
Dod09g0520 560 Gene3D - 338 431 - -
Dod09g0520 560 CDD S49_SppA_67K_type 198 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0520 Dod-Chr9 8020439 8026649 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0520 K04773 - gmx:100781522 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0520 09 8020439 8026649 Dod09g0520 09 8020439 8026649 ECH