Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0509 ATGAACGACGGCGGAATCAAATTCCCCGCCAAGGCAAAACCCTGGGAAACTGGAAGGTGGGAAAGGAGAGAGCAGACAAGAATGGGAGAGAACAGCAGCGAGGAGAAGGAAATCCAAGTCCGTGCCCTAAGCGGCGAATCCATCACTCTCCGCATCCCTCCCACTGCAACCCTCCAACACCTCAAGCTCCTCCTCAACCACTCTTTTCCACCCGCCACCCACTCCCCCAATTTCCACCTCTTCTTCAAGGGTACCAAGTTGAGACCACAGGCCCAAATCGGTTCGTGCCCCATCCAAAACGGGGAGTTTCTCGTCCTCGTTCCATTTGCCAAGAAGGAATCCAAATCCGGCAAATCAGAGCCGTTCAATGCTTCTTCAACTCCCTCCAATGCCACTCATAGCCATTCAGCCTCCAATCTCGCCGATTCCACGTGGTCAAACATAATGGAGGATCTGTCGCATTTGCGTGACGCCGCTGAAACTGACTGCGGTAACAATAACAACAACAACAGCAGCAGCAGCAGCAACAACGCTTCTAATTCCGTGTTTGGGGCATTTGCTTCCGCGCCAAGTAAGGAGAAGGTGGATGTGGCTGAGGCCACTGTACGAGGTTTTGGCCTTGATAGGCAGATGCAGCTTCCGTATCATCTCATATTGAACACGCTGGAGTGTGCTAGCGATGGCGGCCCCCTTGGCGAGCGCAATTGCGAGGTTTTCGTGAAGGTTTTGGAGTCAGTGAATTGCTTATCGGACCTTCCTCTTGGACACTGCAAGTTGTTCAAAAAAGCTGGTTCGATGGGAGGCGCCAGTGGTGGTGGTGGTAGTGCATTCTTGTGTCCGGCGTGGTTGAAGATTGTAATGAAGGCGTTTGCTTTCATTAACATCTTTTCCGCGTTTCTTCATTTGCACTGTAGGGAATTGACCTCGTGTTTGCTGGAAGAAGCACTGAATCAGCTTGGAAAGTTTGGAGTGGATCTTGGCCTCCAGGACATGAAGCATCTTTCCCGTCTATGTCCTCAGCTAGTGCATTTTGGAAATGACGCAGAGAAGACAAGTTTTGGCGATGTCATTTTTGTCATTAACCATTCATCAAGTGATAAACACCGGATCAAAGACAATCCTAAAAGAGCTCGCAAGTGGTTGTACGTTTCAAAGGTTGTCCGTACATTGAAGAGTAGGGATGGTTCTTTCCGAAATAATCTGTGGTGGGCTTTTGAGCAGCTGCCGGTATGTTTATTTGATTTTGTTTTGGGAGATCAGATGGCTGTGGGAATTTCCTTGGAAGAATTGCTTGCAGTATTCAAAGACCAAGATTTTGTTGGAAAAGAAAGCAAAGCAAAACGAGTAAAGAGAAGCTCAAATACCACAAAACCTGGTTCGGACTACATTGGTTGTCATGACACAAGGTCATTGCTGGCTGTGGACATGGTTGAACATCTCAAGACAGGAATTGGATATGAAGGACAGATTGTGCATGTCGAAGACATATGTGCTAGAAACGCCATTCATGCAGAGATCCCAATTGAACTATCAGAAAAAATGAGATCTGCGCTGAAGTGCATCGGTGTTTCCAAGTTGTATAGTCACCAGGCAGAGTCTATACAAGCCTCCCTTCATGGGAAGAATGTTGTCGTGGCTACAATGACATCTAGTGGAAAATCTCTTTGCTATAATGTACCAGTTCTAGAAGATTTGCTGAAGAGTCCGTCATCATGTGCTCTGTACATATTTCCTACAAAGGCATTAGCTCAAGATCAACTAAGAGCTTTGTTGTGCATCACAAAAGGATTTGAAGTTGAGTTCAATATTGGTATATATGATGGTGACACTTCTCATAGTGAGAGGACATGGCTACGTGATAATTCTAGACTGTTAATCACAAATCCAGATATGTTACACATATCAATCTTGCCCCACCATCGGCGATTTAGTCGGATTTTATCAAATCTAAGGTTTGTGGTAATCGATGAAACACATACTTACAAGGGAGCATTTGGATGTCATACTGCCCTTATATTAAGGAGGCTCAAGCGACTATGTTCACATGTATATGGTACTGTTCCTTCCTTTGTTTTTTCCACTGCAACTTCTGCAAATCCTCAGGAGCATTCTATGGTGCTTGCAAATTTACCAACACTGGAGCTATTTCAGAATGATGGAAGTCCATCTGCAAGGAAACTATTCATCCTTTGGAATCCTATTCTGCGTCCGAAGGCTATGTCAAAGAAAGCTCAGTCTGCTATGGGTACTGATAAGTTGGCAGATGAAAGTGCTGATTTTGTTCGTTCAAGCCCAATTGTGGACGTTTCACGCCTTTTTGCAGAAATGGTTCAGCATGGTCTTCGCTGCATCGCATTTTGTAAATCAAGGAAACTCTGTGAGCTTGTTTTATCTTATACACGTGAGATTCTTCATGAGACAGCCCCGCATCTGGTCGATTCCATTAGTGCATATCGTGGTGGCTACATTGCAGAGGAAAGAAGAAAAATAGAGGGTGCATTTTTTGGTGGTAAAATTTGTGGTGTTGCTGCAACAAATGCTCTTGAGTTGGGCATTGATGTTGGGGAAATTGATGTGACTCTGCATCTAGGATTTCCTGGTAGTATTGCAAGCTTGTGGCAACAAGCTGGTAGGGGTGGGAGGAGAGAGAGGCCATCTCTTGCTGTCTATGTTGCATTTGGTGGGCCTCTTGATCAATACTTTATGAAACATCCTACGAAACTTTTTGAAAGACCGATTGAATGCTGTCACATTGATGCCCAAAACAAACAGGTTCTTGAACAGCATTTGGTCTGTGCAGCTCATGAACACCCTCTGAATGTTCACTATGATGAGCAGTATTTTGGTCCTTGCTTAGAGAGTGTTTTAAATTCTCTAAAAGCTGGAGGATACTTGAGTTCTGATCTGTCATCTGATTCTTCTTCTAGAATATGGAACTACATTGGTCCGGAGAAATTACCTTCACATGCAGTCAATATCCGAGCAATAGAAACTGTAAGATACAGTGTCATAGACCAGAAAAAAAATGAAGTCCTTGAAGAGATAGAGGAAAGCAAGGCTTTCTTCCAGGTATATGAAGGTGCTGTGTACATGTGCCAGGGGAAAAACTATTTGGTTGAAAAATTAGATCTATCTAACAGGACTGCTTTCTGCAAAGTGGCTGATCTGAAGTATTATACAAAAACTCGTGATTACACTGATATTCATATCATTGGTGGTAATATTGCTTATCCAGTAACTGTTTCCAACATGTTTCCAAAAACAAATGCCCGAGCTAATGTATGCAAAGTAACAACTACTTGGTTTGGTTTCTATCGTATTTGGAGAGGAAGCAATCAAATCTTTGATACTGTTGACCTAGAACTTCCTCAATATTCATATGAGTCACAGGCAGTTTGGGTTCCGGTGCCACAGTCTATAAAAGAAGAAGTACTAAAGCGAAATTATGATTTCCGTGGAGGTTTGCATGCTGCATCACATGCCGTTTTAAATGTAGTGCCTTTACATATAACTTGTAACTTGTCTGACTTGGCTGCTGAGTGTCCAAATCCTCATGATAGCCGCTATTACCCAGAAAGAATTCTAATATATGATCAGCATCCTGGAGGGTCTGGAATTTCAGTGCAGGTTCAACCACGTTTCACAAAGTTCCTGGAAGCTGCACTAGAGCTTCTCACATCATGCTGCTGCTCGGTGGAAGTAGGTTGCCCTAATTGTGTTCAGAGCTTTGCTTGCCATGAGTATAACGAGGTTTTACACAAGGATGCAGCCATTGTGATAATCAAGGGTATTCTGGATGCAGAGAACTAG 3810 0.4386 MNDGGIKFPAKAKPWETGRWERREQTRMGENSSEEKEIQVRALSGESITLRIPPTATLQHLKLLLNHSFPPATHSPNFHLFFKGTKLRPQAQIGSCPIQNGEFLVLVPFAKKESKSGKSEPFNASSTPSNATHSHSASNLADSTWSNIMEDLSHLRDAAETDCGNNNNNNSSSSSNNASNSVFGAFASAPSKEKVDVAEATVRGFGLDRQMQLPYHLILNTLECASDGGPLGERNCEVFVKVLESVNCLSDLPLGHCKLFKKAGSMGGASGGGGSAFLCPAWLKIVMKAFAFINIFSAFLHLHCRELTSCLLEEALNQLGKFGVDLGLQDMKHLSRLCPQLVHFGNDAEKTSFGDVIFVINHSSSDKHRIKDNPKRARKWLYVSKVVRTLKSRDGSFRNNLWWAFEQLPVCLFDFVLGDQMAVGISLEELLAVFKDQDFVGKESKAKRVKRSSNTTKPGSDYIGCHDTRSLLAVDMVEHLKTGIGYEGQIVHVEDICARNAIHAEIPIELSEKMRSALKCIGVSKLYSHQAESIQASLHGKNVVVATMTSSGKSLCYNVPVLEDLLKSPSSCALYIFPTKALAQDQLRALLCITKGFEVEFNIGIYDGDTSHSERTWLRDNSRLLITNPDMLHISILPHHRRFSRILSNLRFVVIDETHTYKGAFGCHTALILRRLKRLCSHVYGTVPSFVFSTATSANPQEHSMVLANLPTLELFQNDGSPSARKLFILWNPILRPKAMSKKAQSAMGTDKLADESADFVRSSPIVDVSRLFAEMVQHGLRCIAFCKSRKLCELVLSYTREILHETAPHLVDSISAYRGGYIAEERRKIEGAFFGGKICGVAATNALELGIDVGEIDVTLHLGFPGSIASLWQQAGRGGRRERPSLAVYVAFGGPLDQYFMKHPTKLFERPIECCHIDAQNKQVLEQHLVCAAHEHPLNVHYDEQYFGPCLESVLNSLKAGGYLSSDLSSDSSSRIWNYIGPEKLPSHAVNIRAIETVRYSVIDQKKNEVLEEIEESKAFFQVYEGAVYMCQGKNYLVEKLDLSNRTAFCKVADLKYYTKTRDYTDIHIIGGNIAYPVTVSNMFPKTNARANVCKVTTTWFGFYRIWRGSNQIFDTVDLELPQYSYESQAVWVPVPQSIKEEVLKRNYDFRGGLHAASHAVLNVVPLHITCNLSDLAAECPNPHDSRYYPERILIYDQHPGGSGISVQVQPRFTKFLEAALELLTSCCCSVEVGCPNCVQSFACHEYNEVLHKDAAIVIIKGILDAEN* 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0509 1269 MobiDBLite consensus disorder prediction 1 35 - -
Dod09g0509 1269 CDD Ubl_ubiquitin_like 38 107 - -
Dod09g0509 1269 MobiDBLite consensus disorder prediction 115 138 - -
Dod09g0509 1269 Gene3D - 37 131 - -
Dod09g0509 1269 SUPERFAMILY Ubiquitin-like 31 120 IPR029071 -
Dod09g0509 1269 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 534 715 IPR014001 -
Dod09g0509 1269 MobiDBLite consensus disorder prediction 119 138 - -
Dod09g0509 1269 Pfam MrfA Zn-binding domain 1158 1240 IPR018973 -
Dod09g0509 1269 MobiDBLite consensus disorder prediction 14 35 - -
Dod09g0509 1269 MobiDBLite consensus disorder prediction 159 178 - -
Dod09g0509 1269 SMART helicmild6 802 883 IPR001650 -
Dod09g0509 1269 SMART ultradead3 522 728 IPR014001 -
Dod09g0509 1269 Gene3D - 765 890 IPR027417 -
Dod09g0509 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 535 889 IPR027417 -
Dod09g0509 1269 CDD SF2_C_Hrq 728 892 - -
Dod09g0509 1269 Pfam DEAD/DEAH box helicase 528 697 IPR011545 GO:0003676|GO:0005524
Dod09g0509 1269 Pfam Helicase conserved C-terminal domain 775 882 IPR001650 -
Dod09g0509 1269 PANTHER ATP-DEPENDENT HELICASE HRQ1 50 1268 - -
Dod09g0509 1269 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 768 926 IPR001650 -
Dod09g0509 1269 Gene3D - 499 717 IPR027417 -
Dod09g0509 1269 Pfam Ubiquitin family 38 107 IPR000626 GO:0005515
Dod09g0509 1269 CDD DEXHc_Hrq1-like 526 703 - -
Dod09g0509 1269 MobiDBLite consensus disorder prediction 160 178 - -
Dod09g0509 1269 ProSiteProfiles Ubiquitin domain profile. 36 107 IPR000626 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0509 - - adu:107470956 1941.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0509 09 7816414 7829460 Dod09g0509 09 7816414 7829460 ECH