Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0507 ATGCGGCGGCGGCCGGCGGCCGAGTTCCGGCGACCGGTTCGGCGGCGGTTCCCTGATTGGATCTGGTTGCTTCTCGGCGCTTTCTCTGTTGCGGGTTTGGTTTTGTTCATTGTGCAGCACAACCACCACGGAGATCGGGTCCAGCATCCCGTTCAGGAGAGAAATGCAAGAGTTGGACATTTTGCAAAAGAGAGTTTGAATTTTACTGAAGAAATTTTACGTGCAACATCCTTTTCAAGGCAACTAGCAGAGCAAATGGTTCTGGCCAAGGCTTATGTGGTTATTGCCAAAGAGCACAATAATCTTCACTTAGCCTGGCAGCTTACCTCAAAGATTAGAAGTTGCCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGGGAGCCTGTTACCCTGGAGGAAGCAGAGCCAATTATTAAAAGCCTATCTTCCCTAATTTTCAAGGCACAGGATGTCCATTATGACATTGCTACCACTCTAGTGACAATGAAATCGCATATTCAAGCTCTTGAAGAGCGTGCTAATGCAGCAACAGTTCAAAGCACTGTGTTTGCTCAAATATCAGCCGAAACACTACCCAAGAGTCTTCATTGCCTAAATGTGAAACTTATGACTGACTGGCTAAAGACACCATCACTGCAAAAACTCTCAGATGAGAGGAGAAACTCCCCCTGGCTTATGGACAACAGTCTATATCATTTCTGCATTTTTTCAGATAATGTACTGGCAACATCTGTAGTTGTTAACTCTACTGTCATCAATGCTGACCATCCAAAACAGTTGGTCTTTCACGTTGTCACTGATGGTGTCAATCATGGAGCAATGCAAGCATGGTTCCTTAGTAATGATTTTAAAGGGGCTAACATAGAGGTGCAGAATATTGAGGAATTTCACTGGTTGAATGAATCTTATTCTCCAATTGTCAAACGGCTCAACAATCCAGAAGCACGAGCCTTCTATTTCGGGACTTATCAAGATGTGAATGTTGAACCGAAACTCCGGAACCCCAAGTTTTTGTCTTTACTGAATCATCTTCGGTTTTACATCTCTGAGATTTATCCTCAACTTGAAAAGGTTGTTTTACTAGATGACGATGTTGTTGTCCAGAAGGACCTGACCGCTCTTTTCTCTCTGGATATGCATGGAAATGTGAATGGTGCAGTTGAAACTTGTCTTGAAGCGTTTCATCGTTTCTACAAGTATCTCAACTTTTCAAATTCAATTATAAGCTCCAAGTTTGATCCGCAGGCATGTGGATGGGCATTTGGTATGAATGTTTTCGACTTAGTTGCGTGGAGGAGAGCAAATGTGACAGCAAGATATCACTACTGGCAGGAGCAAAATGCTGATGGGACCCTCTGGAAGCTTGGTTTACTTCCTCCCGCTCTTCTAAGTTTTTATGGTTTGACAGAACCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAATATTGACAGCCGCCTAATTGAAAGTGCGGCAGTTATTCACTTCAATGGGAACATGAAGCCATGGCTGAAGTTGGCTATAGGCAAGTATAAGCCAATATGGCACAGATCATTTCAAACTCTTGATCTATGA 1587 0.4342 MRRRPAAEFRRPVRRRFPDWIWLLLGAFSVAGLVLFIVQHNHHGDRVQHPVQERNARVGHFAKESLNFTEEILRATSFSRQLAEQMVLAKAYVVIAKEHNNLHLAWQLTSKIRSCQLLLSKAAMTGEPVTLEEAEPIIKSLSSLIFKAQDVHYDIATTLVTMKSHIQALEERANAATVQSTVFAQISAETLPKSLHCLNVKLMTDWLKTPSLQKLSDERRNSPWLMDNSLYHFCIFSDNVLATSVVVNSTVINADHPKQLVFHVVTDGVNHGAMQAWFLSNDFKGANIEVQNIEEFHWLNESYSPIVKRLNNPEARAFYFGTYQDVNVEPKLRNPKFLSLLNHLRFYISEIYPQLEKVVLLDDDVVVQKDLTALFSLDMHGNVNGAVETCLEAFHRFYKYLNFSNSIISSKFDPQACGWAFGMNVFDLVAWRRANVTARYHYWQEQNADGTLWKLGLLPPALLSFYGLTEPLDRRWHVLGLGYDLNIDSRLIESAAVIHFNGNMKPWLKLAIGKYKPIWHRSFQTLDL* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0507 528 CDD GT8_like_1 231 521 - -
Dod09g0507 528 PANTHER HEXOSYLTRANSFERASE 5 521 - -
Dod09g0507 528 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 524 IPR029044 -
Dod09g0507 528 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 5 521 IPR029993 GO:0047262
Dod09g0507 528 Pfam Glycosyl transferase family 8 235 510 IPR002495 GO:0016757
Dod09g0507 528 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 233 527 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0507 Dod-Chr9 7796092 7799678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0507 1 521 Glycosyltransferase AT2G20810 53.714 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0507 K13648 - gmx:100817381 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0507 09 7796092 7799678 Dod09g0507 09 7796092 7799678 ECH
Dod05g1818 05 43699701 43704384 Dod09g0507 09 7796092 7799678 PCT