Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0426 ATGAGTGAGGTATTTGAAGGGTACGAGCGTCAATACTGTGAGCTATCGGCGAATCTTTCGCGGCAATGCACTGCAGCCTCTTCTCTTCATGGAGAACAGAAGAAGCAGAAACTTTCTGAAATAAAAGCCGGATTAGATGATGCTGATACATTGATTCGGAAAATGGACCTTGAGGCTAGGAGTTTGCAGCCAAGTATGAAGGCTACTCTTCTTGCCAAGTTAAGGGAATATAAAACTGATTTGAATAATTTGAAGAATGAAGTAAAAAGGGTCACATCGGCTAATGTCAACCTTACTGCTCGAGATGAGTTGCTGGAGTCGGGACGGGCTGATACAGTGACGGTATCAAATGACCAAAGAGGAAGACTGCTGATGTCTACTGAGAGATTAAATCAGTCCACTGATAGAATAAAGGAGAGCAGAAAAACAATGCTGGAGACGGAGGAGCTTGGTGTCTCTATCCTCCAAGATTTGCATCAACAGCGTCAATCTCTACTCCATGCCCACAATACGCTCCATGGAGTGGATGATAACATTAGTAAGAGCAAGAGGATTTTGGGAGCCATGTCAAGAAGGATGAGCCGGAACAAATGGATTGTTGGCTCTTTGATGGCAGCTCTAGTCCTTGCAATTATATTTATCCTATGTTTCAAGCTGACTCGTTAG 666 0.4354 MSEVFEGYERQYCELSANLSRQCTAASSLHGEQKKQKLSEIKAGLDDADTLIRKMDLEARSLQPSMKATLLAKLREYKTDLNNLKNEVKRVTSANVNLTARDELLESGRADTVTVSNDQRGRLLMSTERLNQSTDRIKESRKTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNISKSKRILGAMSRRMSRNKWIVGSLMAALVLAIIFILCFKLTR* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0426 221 PIRSF Membrin-2 1 219 IPR027027 GO:0005484|GO:0005794|GO:0016192
Dod09g0426 221 CDD SNARE_Vti1 127 186 - -
Dod09g0426 221 SUPERFAMILY SNARE fusion complex 130 189 - -
Dod09g0426 221 Pfam Vesicle transport v-SNARE protein N-terminus 12 90 IPR007705 GO:0006886|GO:0016020
Dod09g0426 221 Coils Coil 67 101 - -
Dod09g0426 221 Gene3D - 117 197 - -
Dod09g0426 221 PANTHER VESICLE TRANSPORT V-SNARE 13-LIKE 1 220 - -
Dod09g0426 221 Gene3D - 1 97 IPR038407 -
Dod09g0426 221 Pfam Snare region anchored in the vesicle membrane C-terminus 128 193 - -
Dod09g0426 221 SUPERFAMILY t-snare proteins 6 92 IPR010989 GO:0016020|GO:0016192
Dod09g0426 221 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0426 Dod-Chr9 6368218 6371226 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0426 K08493 - gmx:100801744 371.318