Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0408 ATGAACTTCAACCTCGTGCTAGTTGTTACAGTGGCCACGATTTTAGGAATTGGGCTTGAAGGTTGCCATTGCAAGGTTGTGCAATTCATCTTTGGAGACTCACTCTCGGATGTTGGAAACAACAAGTACCTCTCCAAAAGCCTTGCTCAGGCAACCTTGCCTTGGTATGGTATTGACTTGGACCAGGGGCTCCCCAATGGGAGGTTCTGTAATGGCCGCACAGTTGCCGATATAATAGGTGATAAAATGGGCCTTCCTAGGCCTCCAGCATTTCTGGACCCATCATTAACTGAGGATGATATATTGGAAAATGGTGTCAATTTTGCTTCTGGGGGTGGTGGCATATTGAATGACACTGGGAGCTATTTTATTCAAAGGTTTTCTCTCTACAAACAGATTGAACTATTTCAGGGAGCACAAGAACTAGTTAGAGGCAAAATTGGGAAAGAGGAGGCAGAGAAGTTTTTCCTGGGAGCTCGTTATATTGTTGCTTTAGGCAGCAATGACTTCATCAACAATTACTTGATGCCTGTTTACACTGAATCATGGACATACAATGATCAAACCTTCATTGACTACTTAATAGGAACACTACAACAACAACTGAAGCTATTGCACAGCTTAGGAGCAAGGCAGCTGATGGTGTTTGGGCTGGGCCCAATGGGCTGCATTCCCCTTCAAAGGGTGCTTAGTACTTCTGGGAATTGTCAAGATAGGACCAACAAGCTGGCCCTTGCCTTTAATAAAGCTGCAAGCAAGTTAATGGATGGCTTGGGGAAACAACTTCCCAATTCAAGCTACAGATTTGGAGATGCATATGATGTTGTTAATGATGTGATTACCAACCCAAAGAAGTATGGATTCCAAAATTCAGACTCACCCTGTTGCTCGTTTGGGAAGATTAGACCCGCTCTTACATGTTTACCTGCATCAACACTTTGCAAAGACAGAAGCAAGTACGTTTTTTGGGATGAGTACCACCCCACGGATAGTGCTAATGAGCTCATAGCCAATGAGCTCATCAAGAAATTTGGATTTTTGCGTGTTGATCAAACAGGTGCTCCTTCACCATCACCTGCTGTTGCTCCCTCTGCAGATGATTAG 1104 0.4402 MNFNLVLVVTVATILGIGLEGCHCKVVQFIFGDSLSDVGNNKYLSKSLAQATLPWYGIDLDQGLPNGRFCNGRTVADIIGDKMGLPRPPAFLDPSLTEDDILENGVNFASGGGGILNDTGSYFIQRFSLYKQIELFQGAQELVRGKIGKEEAEKFFLGARYIVALGSNDFINNYLMPVYTESWTYNDQTFIDYLIGTLQQQLKLLHSLGARQLMVFGLGPMGCIPLQRVLSTSGNCQDRTNKLALAFNKAASKLMDGLGKQLPNSSYRFGDAYDVVNDVITNPKKYGFQNSDSPCCSFGKIRPALTCLPASTLCKDRSKYVFWDEYHPTDSANELIANELIKKFGFLRVDQTGAPSPSPAVAPSADD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0408 367 Gene3D SGNH hydrolase 27 344 IPR036514 -
Dod09g0408 367 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Dod09g0408 367 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 357 - -
Dod09g0408 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 357 - -
Dod09g0408 367 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
Dod09g0408 367 SUPERFAMILY SGNH hydrolase 29 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0408 Dod-Chr9 6119425 6122297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0408 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 33.121 1.27e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0408 - - gmx:100803991 635.565