Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0391 ATGGCGACGAGTATAGGCATTATGGATAGTGCTTACTTTGTCGGCAGGAACGAGATTCTCACTTGGATCAACAACCGCCTTCAACTCAACCTCTCTCGCATTGAGGAGGCTGCATCTGGTGCTGTTCAATGCCAGATGATGGACATGACTTATCCAGGGGTTGTTCCAATGCACAAGGTGAACTTTGATGCAAAGACAGAGTATGATATGATCCAGAATTACAAAATTCTGCAGGAAGTGTTCAATAAGCTGAAAATTGAAAAGCATATTGAAGTTAACAGACTAGTGAAAGGCCGACCTCTGGACAACTTGGAGTTTCTACAATGGCTGAAACGTTACTGTGATTCTGTGAATGGTGGCATTATGAATGAGAACTATAATCCCGTGGAGCGTAGGTCTAAGGGTGGAAAGGACCGAAATCTTAAGAGTCTGAAGAGCTCAAAATCTCTACAAACAAGTGCTATGAATAATTCTGGCCCAGGCGACACACTAGGGCCAAAACAATTGAGGTCAAGTGGAGGAGCAGGCGGGCTTAATTCTTCAGCAGAGATTCAGGCTTTGTCCAAGCAGGTTACTGATCTCAAACTCTCAGTGGATCTCTTGGAAAAAGAAAGGGACTTCTACTTTGCAAAACTAAGGGATATAGAAATTCTTTGTCAAGCTGCAGAAGTGGAGAATGATCCTATGTCTGTTGCAATTAAGAAGATTCTGTATGCTGCTGATGCAAAGGAATCGGCATTAGATGAAGCTCAGGATTATCTTCATCAAACCTTGAATGCTGCCGAAGACGAAGCTGAAGCTGAAGCCTGA 810 0.4333 MATSIGIMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKVNFDAKTEYDMIQNYKILQEVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRSKGGKDRNLKSLKSSKSLQTSAMNNSGPGDTLGPKQLRSSGGAGGLNSSAEIQALSKQVTDLKLSVDLLEKERDFYFAKLRDIEILCQAAEVENDPMSVAIKKILYAADAKESALDEAQDYLHQTLNAAEDEAEAEA* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0391 269 MobiDBLite consensus disorder prediction 124 177 - -
Dod09g0391 269 ProSiteProfiles Calponin homology (CH) domain profile. 13 115 IPR001715 GO:0005515
Dod09g0391 269 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 176 246 IPR004953 GO:0008017
Dod09g0391 269 Gene3D - 6 134 IPR036872 -
Dod09g0391 269 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1 267 IPR027328 GO:0008017
Dod09g0391 269 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1B 1 267 - -
Dod09g0391 269 SUPERFAMILY Calponin-homology domain, CH-domain 5 132 IPR036872 -
Dod09g0391 269 MobiDBLite consensus disorder prediction 145 165 - -
Dod09g0391 269 Gene3D - 177 257 - -
Dod09g0391 269 Coils Coil 184 204 - -
Dod09g0391 269 MobiDBLite consensus disorder prediction 130 144 - -
Dod09g0391 269 Pfam Calponin homology (CH) domain 16 114 IPR001715 GO:0005515
Dod09g0391 269 SUPERFAMILY EB1 dimerisation domain-like 183 242 IPR036133 GO:0008017
Dod09g0391 269 Pfam EB1-like C-terminal motif 201 239 IPR004953 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0391 Dod-Chr9 5804151 5809576 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0391 K10436 - gmx:100809691 449.129