Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0388 ATGTTGGAGGGTCCATCCTTTCTCATTTCGAGGGACTTACCAGGCTCATGTGAGCAAGAGAGCGAGTGGATTTACAATACTTTCCGTGTGATGGAGCTTTCAAACAATAAGCGCCGACTGGAACTAGAGGAAGAGGCTGTGTTGAGAAAGTCTAGCAAGCTTTCAGATGCTCCTGAGGAGGGGGAGACACAGATGGATACACTTGATCTTTCCCTTTCCTTTAACCAATCGAACGAACAAGATCATGCAGGTGATCAATCAGACTCTAGTTCTCTTATCCACCAACTCGGCAGGGACATCTCAATTAATTGTCTCCTACGATGCTCAAGGTCTGACTATGGCTCGATTGCATCACTGAATCAGAGTTTTCGATCTCTAATTCGCACTGGAGAGCTTTATAGGCTTAGGCGGCAGATGGGTATCATAGAACATTGGGTATACTTCTCTTGTAATCTCCCTGAATGGGAGGCATTTGATCCAAACCGTGGTCGATGGATGCGATTGCCTAGAATGCCTTCTAATGAATGCTTTATCTGTTCAGATAAGGAGTCATTGGCTGTTGGTACAGAGCTTCTTGTTTTTGGAAAGGAAATAATGTCTCCTGTCATCAACAGATATAGCATTTTGACGAACTCTTGGTCGTCTGGTATGGAAATGAATGTCCCCAGATGCTTGTTCGGTTCTGCCAGCCTTGGAGAAGTTGCCATATTAGCTGGTGGTTGTGATCCTCGTGGTAACATCTTGAGCTCAGCTGAGCTTTATAACTCAGAAACAGGAACCTGGGAGATTCTTCCAAACATGATTAAAGCAAGGAAAATGTGTTCTGGTGTGTTTTTAGATGGGAAGTTTTATGTCATTGGCGGGATTGGAGTAGGCAACTCCAAGCAGCTAACATCTGGTGAGGAGTTTGATCTGCAGACAAGAAAATGGCGTGAAATACCTAACATGTTCCCTGGACGAAATGGAGGATCTGGAGTGACTGAAGTGCGAGCTGCTGCTGAGGCTCCTCCTTTGGTTGCAGTTGTAAATAATGTATTATATGCTGCAGATTATGCACAGCAGGAGGTAAGGAGATATTATAAAGACAGTAACACATGGGTCACTATTGGTAGATTGCCTGAGCGAGTAGTCTCCATGAATGGCTGGGGATTAGCCTTCCGAGCATGTGGAAATATGCTAATTGTTATTGGTGGTCCCAGGGCTTTGGATGGAAGAGTGATTGAGGTTAACGCTTGTGTCCCAGGTGAAGGCGAACTGCAGTGGAACCTGCTAGCCAGCAGGCAATCAGGGAGCTTTGTGTATAATTGTGCAGTGATGGGATGCTGA 1326 0.4532 MLEGPSFLISRDLPGSCEQESEWIYNTFRVMELSNNKRRLELEEEAVLRKSSKLSDAPEEGETQMDTLDLSLSFNQSNEQDHAGDQSDSSSLIHQLGRDISINCLLRCSRSDYGSIASLNQSFRSLIRTGELYRLRRQMGIIEHWVYFSCNLPEWEAFDPNRGRWMRLPRMPSNECFICSDKESLAVGTELLVFGKEIMSPVINRYSILTNSWSSGMEMNVPRCLFGSASLGEVAILAGGCDPRGNILSSAELYNSETGTWEILPNMIKARKMCSGVFLDGKFYVIGGIGVGNSKQLTSGEEFDLQTRKWREIPNMFPGRNGGSGVTEVRAAAEAPPLVAVVNNVLYAADYAQQEVRRYYKDSNTWVTIGRLPERVVSMNGWGLAFRACGNMLIVIGGPRALDGRVIEVNACVPGEGELQWNLLASRQSGSFVYNCAVMGC* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0388 441 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 10 441 - -
Dod09g0388 441 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 10 441 - -
Dod09g0388 441 SUPERFAMILY Kelch motif 150 438 IPR015915 GO:0005515
Dod09g0388 441 Coils Coil 30 50 - -
Dod09g0388 441 Gene3D - 135 431 IPR015915 GO:0005515
Dod09g0388 441 SMART kelc_smart 282 331 IPR006652 GO:0005515
Dod09g0388 441 SMART kelc_smart 234 281 IPR006652 GO:0005515
Dod09g0388 441 Pfam Kelch motif 270 316 IPR006652 GO:0005515
Dod09g0388 441 Pfam Kelch motif 222 267 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0388 Dod-Chr9 5769763 5772643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0388 90 315 EF-hand Containing Proteins AT4G39560 27.197 2.05e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0388 - - gmx:100788507 768.459