Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod09g0371 | ATGGCGGAAGCAGCTAACTCCGTAGGCAGTGGCCAAAAGTTAGCCGGCAAGGTAGCCATCATCACCGGCGGGGCCAGCGGGATCGGCGAGGCGACGGCGCGGTTGTTTGCCGAGCAAGGGGCACGTATGGTGGTGATAGCAGACATCCAAGACGATCTCGGCAACCAAGCAGCAGCATCCATTGGCTCTCACAGGTGCAGCTACGTCCACTGCGACGTGGCAGACGAAGCTCAGGTGAAACACCTCGTGGAGTCCACAGTCAACGCTCACGGCCACCTCGACATCATGTTCAGCAACGCCGGCATCCTCAGCCCCTCCGACCAGACCGTCCTCGACCTCGACGTCTCCCAATTCGACCGTCTCTTCTCCGTCAACGCCCGCGGCATGGCCCTCTGCGTCAAGCACGCGGCGCGTGCCATGGTCAATGGGCGCGTGAGGGGTGCCATCGTGTGCACGGGTAGCATCGCCGCCACGCGCGGGGGGTCCAGTCGCGTCGACTACGTCATGTCGAAGCACGCGGTGCTGGGGCTGGTGCGCTCCGCGAGCATAGCAGCTCGCGGCTCACGGCGTGAGGGTGAACTGCGTGTCACCCAACGCGCTTTCTACGCCCCTGACGCGTGCTTCTCACGGACTGGAGGACGAGGAGCTAAAGAGGCTGTACGAGCAAAACGCGCGGCTGAAGGGCGTCGTTTTGACGCCGAAGCACGTGGCGGACGCGGTGCTGTTCCTTGCGTCCGGTGA | 741 | 0.6397 | MAEAANSVGSGQKLAGKVAIITGGASGIGEATARLFAEQGARMVVIADIQDDLGNQAAASIGSHRCSYVHCDVADEAQVKHLVESTVNAHGHLDIMFSNAGILSPSDQTVLDLDVSQFDRLFSVNARGMALCVKHAARAMVNGRVRGAIVCTGSIAATRGGSSRVDYVMSKHAVLGLVRSASIAARGSRREGELRVTQRAFYAPDACFSRTGGRGAKEAVRAKRAAEGRRFDAEARGGRGAVPCVR* | 247 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod09g0371 | 246 | PANTHER | SHORT-CHAIN DEHYDROGENASE REDUCTASE | 1 | 188 | - | - | |
| Dod09g0371 | 246 | ProSitePatterns | Short-chain dehydrogenases/reductases family signature. | 154 | 182 | IPR020904 | GO:0016491 | |
| Dod09g0371 | 246 | PRINTS | Glucose/ribitol dehydrogenase family signature | 18 | 35 | IPR002347 | - | |
| Dod09g0371 | 246 | PRINTS | Glucose/ribitol dehydrogenase family signature | 167 | 186 | IPR002347 | - | |
| Dod09g0371 | 246 | PRINTS | Glucose/ribitol dehydrogenase family signature | 91 | 102 | IPR002347 | - | |
| Dod09g0371 | 246 | PRINTS | Glucose/ribitol dehydrogenase family signature | 141 | 157 | IPR002347 | - | |
| Dod09g0371 | 246 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 13 | 184 | IPR036291 | - | |
| Dod09g0371 | 246 | Pfam | Enoyl-(Acyl carrier protein) reductase | 23 | 183 | - | - | |
| Dod09g0371 | 246 | Gene3D | - | 3 | 230 | - | - | |
| Dod09g0371 | 246 | PANTHER | OXIDOREDUCTASE-RELATED | 1 | 188 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod09g0371 | Dod-Chr9 | 5513300 | 5516176 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod09g0371 | 12 | 205 | Acyl Lipid Metabolism Gene Families | AT1G24360 | 25.854 | 1.73e-13 | 67.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod09g0371 | - | - | lja:Lj0g3v0235149.1 | 282.337 |