Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0353 ATGAGGCCTCGGAGCCTCGAAAGCCTTACGAAATCATCGCTAACCCGAAAGAGATCGATTCAGTTCCTGATCGGAGTGTCCCTCCTCTACCTCCTCACCGTAACACTCGAAATCCCCTTCGTCTTCCAAACCAAGTTCTCCCCCCTCACGCGCGACGAGCTCATCTCCACCACCACGCGCTCCTCCTCCTCCTCCTCCTCAAACAGCAGACTCCACACCCAACAAGACCTCCAACACTTCCAAGCCCCATCCCGTCCCTTCAAAACCGTCTCCCACAACAACAACGATTCCCCGTCCCCGAGTCAAACTCACTCCCAACTCGGTCTCCTCTCGGGCCTTCCCCTCGGCCCAAAAACCTTCGACCCGGCCCGCAAGTACGGCTCCACGGACCTCTACAAGCTCGCCAACAACGCCCGCGAAGTGGGCCTGGGCCTCTGGGCCGAGCTCCTCAACCACCACCCGAAAACCGTTTATTCCAAACCCGACAACCGTTCGGGTTCGTGTCCCGGTTCGGTTTCGGTTTCCGGGTCGGGGTTCGAGGGGGTTGTGGGTTTGCCGTGCGGGCTGACGCTGGGTTCGCACGTGACGGTGGTGGGGAGGCCGATGGCGGCGCGGCCGGAGTTCGAGCCGAGGATATCGGCGGTGAAGGACGACAACGAGGCGGTGATGGTGTCGCAGTTCGTGGTGGAGCTTCAGGGGCTGAAAACCGTTGATGGAGAGGAACCACCTAGGATTTTTCACTTTAATCCGAGGTTGAAGGGGGATTGGAGCGGGAGGCCCGTGATCGAGATGAACACGTGTTACCGCATGCAGTGGGGCGCTGCCCTCAGGTGTGACGGTTGGAAGTCCAATGCTGATGATGATACTGTTGATAGGCTGGTGAAGTGTGAGAAGTGGATACGGGATGATGAAGATCACGCAGAGGAGTCAAAGGCAACATGGTGGTTCAATAGACTCATAGGCCGCACCAAAAAAGTAACAGTAGACTGGCCATTCCCATTTTCTGAGAACAAGCTCTTTGTTCTTACTCTTAGTGCCGGAATGGAGGGGTATCATGTTACTGTTGATGGGAGGCATGTGGCCTCTTTTCCTTATCGCACTGGTTATACTCTTGATGATGCCACTGGGCTTTCTTTGAGTGGAGACATTGAGGTCCACTCTATATTTGCTGCCTCCTTGCCTTCAACACATCCTAGCTTTGCCCCACAGCGGCATCTTGAATTCTCAGCCAGATGGCGTGCCCCGCCAATTCCTGATTCCGGCGTGGAATTGTTCATTGGTGTCCTCTCAGCTGGAAACCATTTTGCTGAGCGAATGGCTGTGAGGAAGTCATGGATGCAGCACAGGCTTATCAAATCTGCAAAAGTGGTTGCTCGTTTCTTTGTCGCACTGAACCCAAGAAAAGAAGTTAATGCAGAGTTGAAGAAGGAGGCAGAATTTTTTGGTGATATTGTTATAGTGCCTTACCTTGATAACTATGACCTTGTCGTGTTGAAAACAGTAGCCATATGTGAATATGGGGTTCACACAGTTTCTGCCAAGTATATCATGAAGGGCGATGATGACACTTTTGTAAGAGTTGATGCTGTTATCAATGAAGCAAGGAAGGTTCCAGACGATATGAGCTTCTATATTGGGAACATAAATTACTACCACAAACCCTTGCGCTATGGTAAATGGGCAGTGACATACGAGGAGTGGCCAGAAGAAGACTATCCGCCGTATGCTAATGGACCGGGTTATATTTTGTCCTCGGATATTGCACGCAACATTGTTTCTGGATTTGAGATGCAACAACTAAGGTTGTTTAAGATGGAAGATGTGAGTATGGGAATGTGGGTAGAGAAATTTAACACCTCAAAACCAGTACTTTACAAGCACAGCTTAAATTTCTGCCAATTTGGTTGCATAGAAGACTATTACACGGCCCATTACCAATCGCCTAGGCAGATGATGTGCCTTTGGGATAAATTGCAAAGGAATACAAAGCCTCAATGCTGCAATATGAGATGA 2013 0.5082 MRPRSLESLTKSSLTRKRSIQFLIGVSLLYLLTVTLEIPFVFQTKFSPLTRDELISTTTRSSSSSSSNSRLHTQQDLQHFQAPSRPFKTVSHNNNDSPSPSQTHSQLGLLSGLPLGPKTFDPARKYGSTDLYKLANNAREVGLGLWAELLNHHPKTVYSKPDNRSGSCPGSVSVSGSGFEGVVGLPCGLTLGSHVTVVGRPMAARPEFEPRISAVKDDNEAVMVSQFVVELQGLKTVDGEEPPRIFHFNPRLKGDWSGRPVIEMNTCYRMQWGAALRCDGWKSNADDDTVDRLVKCEKWIRDDEDHAEESKATWWFNRLIGRTKKVTVDWPFPFSENKLFVLTLSAGMEGYHVTVDGRHVASFPYRTGYTLDDATGLSLSGDIEVHSIFAASLPSTHPSFAPQRHLEFSARWRAPPIPDSGVELFIGVLSAGNHFAERMAVRKSWMQHRLIKSAKVVARFFVALNPRKEVNAELKKEAEFFGDIVIVPYLDNYDLVVLKTVAICEYGVHTVSAKYIMKGDDDTFVRVDAVINEARKVPDDMSFYIGNINYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSSDIARNIVSGFEMQQLRLFKMEDVSMGMWVEKFNTSKPVLYKHSLNFCQFGCIEDYYTAHYQSPRQMMCLWDKLQRNTKPQCCNMR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0353 670 Pfam Galactosyltransferase 437 618 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dod09g0353 670 SMART Gal_bind_lectin_2 185 390 IPR001079 GO:0030246
Dod09g0353 670 Gene3D - 178 289 - -
Dod09g0353 670 Gene3D - 300 389 - -
Dod09g0353 670 CDD GLECT 185 389 IPR001079 GO:0030246
Dod09g0353 670 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 181 391 IPR001079 GO:0030246
Dod09g0353 670 MobiDBLite consensus disorder prediction 58 108 - -
Dod09g0353 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 184 389 IPR013320 -
Dod09g0353 670 Pfam Galactoside-binding lectin 184 389 IPR001079 GO:0030246
Dod09g0353 670 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 12 670 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dod09g0353 670 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 12 670 - -
Dod09g0353 670 Gene3D - 420 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0353 Dod-Chr9 5299151 5303487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0353 12 670 Glycosyltransferase AT1G74800 62.110 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0353 K20843 - gmx:100795908 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1685 05 42135641 42139592 Dod09g0353 09 5299151 5303487 PCT