Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0288 ATGACTACTCAATCGCCTTCCCCTCCAATCTCCACACCTCAAAACGCAGGTGATGCTGAAATTGGGCAGCCAGAAAATGTGGATCAGCAAAATGCTGGTGAAGATCCAGCTAAACAGAGTTCAAAGGCTTCGGTCTTTGTGAACTCGGAACCGATGCGTGAGGAGCAAGTTCAGAATGCTATCAAGTTTCTGTCGCACCCGAAAGTCAGAGGTTCCCCTGTCGTCTACCGGCGGACCTTCCTGGAGAAGAAGGGCCTTACGAAGGAGGAGATAGATGAGGCCTTTCAGCGCGTACCTGATTCACCGCCAAGTGCGCAGGCAGCTGGTGGAAATCAAGCATCAGACGTTCAACGGCAGGCACAACCCCAAGCTTTGCATCCGGGTGTGTCTGATTTCAGTGGTGTAACTACTTCGTCAAAAACCTCATCACGGTTCAGTTTTCGCTGGTCCCATGCCCTTATTGCAGTTGGATTAGTGGTTGCTTCAGGTGCCGGAACAGCTATGCTAATTAAGAAATCCATTCTTCCTCGGTTAAAATCTTGGATTCGCTATATTGTCTTGGAAGAAGAATGTGATCAATTAAAGACAACAGACTCAAAACCAATGTTGGCAGAAGAAGCTGCACAAGCTGCAAAAGCAGCTGCAGCTGCAGCTGCAGATATGGCAAAAGCAAGCCAAGAAATAATGACTTCAAAATGTGAAGAGAGGAGATACTTTGTGGAAGTTGTGAGCCTTCTAGATAAGCAAGTGCAGGAGATGAAGTTAATGACTAATGCAATAAGAAGATTGGAAGCTTCCAGTGGAGTCTCTTTCTCAAAGCCAGAAGATCAGCAAGTCACCCAAACAAGCTCAAAGACATTGATGGTGAATGGAAAGGGGGACTATGACTCGCGTCCAGTGAGACCTTCATCCCCACCTGCATCTGCTGAACCGTCTAGTGCTCCTCATCCTAAGTCATACATGGAGATAATGGCCATGATCCAAAGAGGAGAGAAGCCTTCTAACATTAGAGATATCGATGATTCACCTCCCAACCCTAATCAGCAACCATCAAATCCTCGCTTAGCCCCTAGAGCCAAGCCTTGGGAAGTTGGTCAGGTGCAACAGACCTCTACCCCAGTATTTCAGTCTCAAGTAAATGGCAAGGACTTGAATTTCAATGTCCAGGATAATGGTGACAAATCAACACCCTGGTGGCAAGCTAATAATAGCAGAATCAGAGAGATTGATAATGGAGCACCTTATGGTGCTGTATCCAGTCAGAAGCCGGTGCAGCGTGTGTGGGTTCCCCCTCAGCCTCCTCCCATAGCAATGCCAGAGGCTGCAGAAGCAATCAGACGTGCGAAGCCACTGGTCCAAACTGGTGAGACACCAGATGATCAGTCAGTAGCTCATTCTTCAGATATCTCTGATAAGGTGGAGAGAATCTCAGAACTATCCAAATCTGAAGGTGCAGTAGAAGGCGGCAATGCCAACTCACTTCTCGGCTCTGCTGAGATAGTGGAAGAACATGAAGTCAATCAAGAATAG 1530 0.4739 MTTQSPSPPISTPQNAGDAEIGQPENVDQQNAGEDPAKQSSKASVFVNSEPMREEQVQNAIKFLSHPKVRGSPVVYRRTFLEKKGLTKEEIDEAFQRVPDSPPSAQAAGGNQASDVQRQAQPQALHPGVSDFSGVTTSSKTSSRFSFRWSHALIAVGLVVASGAGTAMLIKKSILPRLKSWIRYIVLEEECDQLKTTDSKPMLAEEAAQAAKAAAAAAADMAKASQEIMTSKCEERRYFVEVVSLLDKQVQEMKLMTNAIRRLEASSGVSFSKPEDQQVTQTSSKTLMVNGKGDYDSRPVRPSSPPASAEPSSAPHPKSYMEIMAMIQRGEKPSNIRDIDDSPPNPNQQPSNPRLAPRAKPWEVGQVQQTSTPVFQSQVNGKDLNFNVQDNGDKSTPWWQANNSRIREIDNGAPYGAVSSQKPVQRVWVPPQPPPIAMPEAAEAIRRAKPLVQTGETPDDQSVAHSSDISDKVERISELSKSEGAVEGGNANSLLGSAEIVEEHEVNQE* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0288 509 Coils Coil 246 266 - -
Dod09g0288 509 MobiDBLite consensus disorder prediction 269 317 - -
Dod09g0288 509 MobiDBLite consensus disorder prediction 1 52 - -
Dod09g0288 509 MobiDBLite consensus disorder prediction 334 358 - -
Dod09g0288 509 Pfam Pex14 N-terminal domain 53 97 IPR006785 -
Dod09g0288 509 Gene3D - 45 107 IPR036388 -
Dod09g0288 509 MobiDBLite consensus disorder prediction 465 481 - -
Dod09g0288 509 MobiDBLite consensus disorder prediction 105 135 - -
Dod09g0288 509 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 1 490 - -
Dod09g0288 509 MobiDBLite consensus disorder prediction 270 290 - -
Dod09g0288 509 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 490 IPR025655 GO:0005515|GO:0005778|GO:0016560
Dod09g0288 509 Pfam Family of unknown function (DUF5572) 315 364 - -
Dod09g0288 509 MobiDBLite consensus disorder prediction 97 135 - -
Dod09g0288 509 MobiDBLite consensus disorder prediction 448 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0288 Dod-Chr9 4423126 4428595 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0288 K13343 - gmx:100807229 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1622 05 41314152 41318763 Dod09g0288 09 4423126 4428595 PCT