Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0266 ATGGGCGAGAGGATTCCCGATCCGTCGGATTCGCTCCCTCCGCCGCCGCCGCACCAATCCGACGGTGACGACCCCGCCGCTGCCGCCGCCGTGTCACCTTCCTCCCGGTACTCCTCCTGCGGCGGCGATTCCGAGTTCGATCGTTACTGCAGCGCCACCTCTCTCATGGGAACTCCCAGCACCAGCAGCGCCATCACGCTCTTCAACGATTTCTCCGACGCCGATTTCGCCATCGGCTTCGATAATTTCAGCTTAGGAGGAACGAGAATTGAATTGAATCACGGCAACAACAGCGATCGCGTTAGGTTCGGCGCGTTGTCGTCGTCGTCATCGCGGAGCCTCAGGTACGCTTCCAGCGGATTGGAATTGTACGGAGATGGCGGCGACGAGTTTGCGATGATGACTGGGTTGGATTCGTCGGAGTTTTTGGTAGGTTTTGGGAACGAGAATGGTAATGATGATAACGCTGGAATTGGAAGTAGTCAGAATAGTGATGTTAAATTGAGAGAAGAGGTGGAGAGGGAAGAAGAGGATTTAGGGTTATCGGATTGTGAGCATTTGGAAGGTGAGGATCCGATGTATGTGAGAGGTGAAAGTGACGGGAAATTGGAAGGTGGATTGTGTTCTTCTGAGGATGTAGGAATGATGGATCGATTGGATGTGTTTGATGCGCGGTTGAGGGTGGAGAAGGGAGAAGAGGAAGGAGGGTTGTCGGATTTTGAGCATTCTGAGGGCGAGGATTCGAGGTATAACTACGGTAGTGACGGTGGTAGTGGTGATGAAAGAAATGAGTCTTTTGTTTCGAAGAGTGTGCTGTATCACAAGGAATTGGAGGCGCAAAATGAGGATTCAATGGGTAATTATGGCAGTAATGGAGGTAGTGGTGGTGATGAAAGAAATGAGTCTTTTTTTGTGCCGAGGAGTGTGCAGTATCGCGAGGAATTAGAATCGCGAAATGAGAATCCGTTGCTTATAAACTCCTCTGTGGCATTTGGTTCGGATGATTTGGATGATTTTCTGATGGAGAATGAAAGGTTTGGCCATGGTTCCGCAATGACTGTTCTGTTTCGTAGGAAGCAAGAAAAGGATCCTTATGAGGTTTTAGCAAGTGCTGGTCATGAAGAGGAGGAAGGGAAAGAAAAAGTGGGAAGTGTTGCAGTTGATGAAAAAGTTGAAGTAGAAGATAGGGGTGAGCTAGAAGGTGTAAAAGAGGTTAGAGATGTTCTTCCTCCAGCATGTTGTCAAGTTCAGGGTGTTGATAGTAAGTTGAGTAATGTAACTGACAGTTCTACACATGCCTCAACTGATTTTCCAAACACGGTCGATCCGCAGGTCCAAGTTGCTGATGCATTGGTTAATTCTCCCAAAACTTCTTCAATCACCAAGGCACATGATGTAGATTTGGATGCGATGGCAGAAGAAGGTCTTCAGCACAGGGGATTAAATGCTATTGAGGGAGGAAACATGGAAAAGGGGAATCAGGGTATCAACAGTGAGGAGGGTGTTGAGGTTAATGTTGCTCAACATGTGAAAACCCCAGAGTTGGATAATTCTATGTTCAAGTTTGATCACTTTTCTGATAGTGGAGTTGATCAAAGTTCTTCTAATCCGTCAAATCATCTAGGGAATACCAGTGGGAAGTCATTTGAGAACCTTGAACAAATTGTACATACTTCAAATGTTGGAATGAGGAAAACATTAGAGAGCAATTCCACTTTGAAAACGGATCACTTAGAGAAAAGTCCTGCGGTATCTAGGACAGAGGACTTTGAGCTAAATGAATTCTATGATGAGGTCGTTCAGGAAATGGAGGAAATTTTGCTGGACTCTCTGGATTCTCCTGGCACTAGGCTTGCCATGGGTAACAGATTGGTTGAACCACACTTGGCTTTGCCTTCAAGAGATGGTGGGCTGACTGCTTCTACTTCTAGTATGGATGATGCTTACCTGCTAGCTCTGCGCCCAGCAAGAATAGACAGGATTGAAGTGGTAGGTGCAAGGCAGAAGAAAGGGGATATTTCTTTCAGCGAAAGATTGGTTGGGGTGAAGGAATACACTGTATATAGAATAAAAGTGTGGAGTGGCAAGGACCAGTGGGAGGTTGAACGGCGATATCGTGATTTCCTCAGCCTCCATCGTTTCTTGAAAACCTTATTCACTGAGCAAGGGTGGGCTTTACCTCTGCCTTGGTCTTCTGTTGAAAAGGAGTCCAAGTTGTTTAGAAGTGCATCTCCTGATATTATTGCAAAGAGAAGTGTTCTCATTCAAGAGTGTTTACAATCTATTCTCCGCACCCGGTTCTTTTCAAATCCTCCAAGACCATTAATTTCATTCTTGTCTCCTGAAGATTCACATCCTATTTCACATGTGTCAAATGCTTCAGTGTCTCAGTCTTCTTTAACAAGAGGGGCAAACATTAGGAACTTTTCCGCTTTAGGCAAGACCATATCACTTATAGTTGAAATTCCACCAAACAAATCTGTGAGACAGTTGTTAGAAGCACAACATTACACTTGTGCTGGATGCCATAAGCATTTTGATGATGGGAGAACTATGATTTGGGATTTTGTACAGACATTTGGATGGGGAAAGCCCCGACTTTGTGAATACACTGGTCAATTATTTTGCTCTTCTTGCCACACAAATGAGACGGCAGTGTTGCCAGCAAGGGTTTTGCATAATTGGGATTTCACACACTATCCTGTTTCTCAGCTGGCAAAGTCTTATCTGGATTCTATACATGAACAGCCCATGCTTTGTGTCACTGCAGTTAATCCGTTCCTTTTGTCAAAGGTCCCGGCCTTGCTTCATGTTATGAGTGTCAGAAAAAAGATAGGAATCATGCTTCCATATGTTCGGTGCCCATTTCGGAGGTCTATCAACAGAGCACTTGGAAACCGGAGATATCTTCTTGAAAGCAATGACTTCTTTGCTCTTAGAGACTTGATTGACCTTTCAAAAGGAGTCTTTGCTGCACTTCCGGTGATGGTAGAAAATCTATCAAAGAAAATCCTGGAACACATTACTGACCAATGCCTCATATGCTGTGATGTGGGAGTCCCCTGCAGTGCCCGGCAAGATTGCAGTGACCCATCTTCTCTCATTTTCCCATTTCAGGAAGACGATATCGAAAGGTGCAAATCTTGTCAGTCAGTTTTCCATAAGCGTTGCTTCAGAAAGCTCGGAAACTGCCCTTGTGGGGCACACCTCAGATTGAATGAGACAAGGAGCTTAATCAACAGAGCAAGACAACAGAGGGGAGATGAGGAGACAAGAGGAACTTTGGACTTTTTAGGCAGGGGACTTGGTTCTGGGTTATCATCCAGATTCCTCTCTGGGTTATTTACGAAGGAGAAGGAAAAGCCTGAGAAGACTAGGGAGCATAGAGACGAAAATATTATCTTAATGGGTTCCTTGCCAAGCACTTCTTTATGA 3435 0.453 MGERIPDPSDSLPPPPPHQSDGDDPAAAAAVSPSSRYSSCGGDSEFDRYCSATSLMGTPSTSSAITLFNDFSDADFAIGFDNFSLGGTRIELNHGNNSDRVRFGALSSSSSRSLRYASSGLELYGDGGDEFAMMTGLDSSEFLVGFGNENGNDDNAGIGSSQNSDVKLREEVEREEEDLGLSDCEHLEGEDPMYVRGESDGKLEGGLCSSEDVGMMDRLDVFDARLRVEKGEEEGGLSDFEHSEGEDSRYNYGSDGGSGDERNESFVSKSVLYHKELEAQNEDSMGNYGSNGGSGGDERNESFFVPRSVQYREELESRNENPLLINSSVAFGSDDLDDFLMENERFGHGSAMTVLFRRKQEKDPYEVLASAGHEEEEGKEKVGSVAVDEKVEVEDRGELEGVKEVRDVLPPACCQVQGVDSKLSNVTDSSTHASTDFPNTVDPQVQVADALVNSPKTSSITKAHDVDLDAMAEEGLQHRGLNAIEGGNMEKGNQGINSEEGVEVNVAQHVKTPELDNSMFKFDHFSDSGVDQSSSNPSNHLGNTSGKSFENLEQIVHTSNVGMRKTLESNSTLKTDHLEKSPAVSRTEDFELNEFYDEVVQEMEEILLDSLDSPGTRLAMGNRLVEPHLALPSRDGGLTASTSSMDDAYLLALRPARIDRIEVVGARQKKGDISFSERLVGVKEYTVYRIKVWSGKDQWEVERRYRDFLSLHRFLKTLFTEQGWALPLPWSSVEKESKLFRSASPDIIAKRSVLIQECLQSILRTRFFSNPPRPLISFLSPEDSHPISHVSNASVSQSSLTRGANIRNFSALGKTISLIVEIPPNKSVRQLLEAQHYTCAGCHKHFDDGRTMIWDFVQTFGWGKPRLCEYTGQLFCSSCHTNETAVLPARVLHNWDFTHYPVSQLAKSYLDSIHEQPMLCVTAVNPFLLSKVPALLHVMSVRKKIGIMLPYVRCPFRRSINRALGNRRYLLESNDFFALRDLIDLSKGVFAALPVMVENLSKKILEHITDQCLICCDVGVPCSARQDCSDPSSLIFPFQEDDIERCKSCQSVFHKRCFRKLGNCPCGAHLRLNETRSLINRARQQRGDEETRGTLDFLGRGLGSGLSSRFLSGLFTKEKEKPEKTREHRDENIILMGSLPSTSL* 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0266 1144 Pfam PX domain 693 781 IPR001683 GO:0035091
Dod09g0266 1144 SUPERFAMILY PX domain 679 784 IPR036871 GO:0035091
Dod09g0266 1144 MobiDBLite consensus disorder prediction 231 263 - -
Dod09g0266 1144 MobiDBLite consensus disorder prediction 526 547 - -
Dod09g0266 1144 ProSiteProfiles PX domain profile. 666 785 IPR001683 GO:0035091
Dod09g0266 1144 MobiDBLite consensus disorder prediction 283 297 - -
Dod09g0266 1144 SMART DUF4206_2 866 1073 IPR025258 -
Dod09g0266 1144 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 56 1144 - -
Dod09g0266 1144 Pfam Putative zinc-RING and/or ribbon 866 1069 IPR025258 -
Dod09g0266 1144 SMART PX_2 662 782 IPR001683 GO:0035091
Dod09g0266 1144 MobiDBLite consensus disorder prediction 527 547 - -
Dod09g0266 1144 MobiDBLite consensus disorder prediction 1 41 - -
Dod09g0266 1144 MobiDBLite consensus disorder prediction 278 301 - -
Dod09g0266 1144 Gene3D - 674 784 IPR036871 GO:0035091
Dod09g0266 1144 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 56 1144 - -
Dod09g0266 1144 MobiDBLite consensus disorder prediction 231 249 - -
Dod09g0266 1144 CDD PX_domain 673 780 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0266 - - gmx:100800081 1230.7