Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0260 ATGACTTCGCCGGCCAGACAACCATGCCAAGGGATAAATATGGGCACAGTAGAAGTTATTGATTTATCTAGTGATGATGAAAGTGAAAAGGTTATTCCCAAAGCTGTTAAGTTGGAGCCAGATTTTGTTTCGGGTGCAAAGCAACAAAATGAGACTGACAAAGGGCTACTAGCCAAGCATAAGAGATCTCAAAATTATTCTACTAGACAAGATTCCGAAGAAACTATTAGTTCTAATGCTCCAAGTACACCTCATAGTAGTGTATTGGAGCAGGGATTGTCACCAGTTGATGACACAGACATTTCTTATGCATCACCCATTTGTGCAGCGCCCATCTGTAGGCAGTTTTGGAAAGCTGGAAACTATGAGAGTGGGCTTGGTTCTAAAGTCACAGTCCAAAATGCAAAAAACTATCTACATGTACACCCTATGTTCCTTCACTCGAATGCAACTTCACATAAGTGGGCATTTGGTGCAATAGCGGAGCTTCTTGATAATGCTGTTGATGAGATCCAAAATGGGGCTACCTTTGTCATTGTAGATAAAACTTCAAATCCAAAGGATGGAAGTCCAGCACTGTTGATTCAAGATGATGGTGGAGGAATGGATCCAGAAGCAATGCGTCAGTGCATGAGTTTTGGATTTTCAAATAAGAAGTCAGAGCTTGCTATTGGGCAGTATGGAAATGGCTTTAAGACCAGCACTATGAGGCTTGGATCCGATGTCATAGTCTTCTCTCGCCATCTGAATAACGGGATATTGACTCAAAGCATTGGACTTCTGTCATATACATTTTTGATGCAAACACAGCTTGACAGAATAGTAGTACCCATGGTGAATTATGAGTTTAATACAACAGCTGGATCACTGGAAATATTAAATGGCAAAGAGCACTTTGTCGCTAATTTATCCTTAATGTTGCGCTGGTCACCATATTCATCAGAAGCAGAACTTCTAGAACAGTTTTATGACATTGGATCTCATGGTACTAAAGTCATTATCTACAACTTGTGGTCCAACGATGATGGGAATTTGGAGCTAGACTTTGATACGGACCCTGAGGACATTCGAATTGCTGGGGATATCAAGAAGGTTGATACACGCCATGCCTGGAAGACAATAAATGAGCAACACATTGCTACACGGTTTCACCACTCTTTACGTGTTTACTTGTCCATATTGTACTTTCGGAGTCATGAAAGTTTTCAAATTATATTGCGAGGGAAGGTTGTGGAGCCGCATAACATTGCTAATGATCTTAAATATCCTGAATTTATTGTATATAAACCACAAGTTGGCGGATCTGTGCAGGCAACAGTTGTGACAACAATTGGTTTTCTTAAGGAAGCTCCTCAAATCGCTTTACACGGTTTTAATGTATATCACAAAAACCGGCTGATACTGCCATTTTGGCAGGTTGTGAGGTATTCAGACAGCAGAGGCAGAGGAGTTGTTGGTGTCCTGCAAGCAGATTTTGTTCAGCCAACTCATAATAAACAAGATTTTGAGAAAACTTCATTGTTTCAAAAACTTGAAGTGCGATTGAAGGAAATGACATGGGAGTACTGGGATTGCCATTGTAGACTAATTGGGTATAGGGAAAACTATCCACTGCGTCCTTCAGTGAAGAAACCAACTGGTGTAGATAAACCAGTCACACTGAGCAAAAGTTCCTCCCCTGTTGTCAATAGTAAAATAGCATATGGGAATTCTGAACTAAAGATGACAACCCTGCAAAGCACATCTGTACAAGGATCTAATAAGAGGAAGACAGATGAAGTAATTGACATCCAGAAGTTGAAAAAGCATGCAATGGAAGAGAATGTAACAGGTGTTGGTTTCAGTCAGGATAAACAGGTCACTGCAATCCCTGCAGATCAGGTTGTAGACGAAGAGGCTATGAACTTGATGGAAGAAAACAAGAAACTACGCGCAAAATGTGTGGAATATGAACAGGCAGAGGAAGAACTTAATCTCAAGGCAACGAAGCTTAGAAGTGAAATACAAGAAGCCCATGAAGAGTATAATCGGCTTTTGGCTTTACTGCAGTCGCTAGATGTGAAGAATGAGTAG 2073 0.4071 MTSPARQPCQGINMGTVEVIDLSSDDESEKVIPKAVKLEPDFVSGAKQQNETDKGLLAKHKRSQNYSTRQDSEETISSNAPSTPHSSVLEQGLSPVDDTDISYASPICAAPICRQFWKAGNYESGLGSKVTVQNAKNYLHVHPMFLHSNATSHKWAFGAIAELLDNAVDEIQNGATFVIVDKTSNPKDGSPALLIQDDGGGMDPEAMRQCMSFGFSNKKSELAIGQYGNGFKTSTMRLGSDVIVFSRHLNNGILTQSIGLLSYTFLMQTQLDRIVVPMVNYEFNTTAGSLEILNGKEHFVANLSLMLRWSPYSSEAELLEQFYDIGSHGTKVIIYNLWSNDDGNLELDFDTDPEDIRIAGDIKKVDTRHAWKTINEQHIATRFHHSLRVYLSILYFRSHESFQIILRGKVVEPHNIANDLKYPEFIVYKPQVGGSVQATVVTTIGFLKEAPQIALHGFNVYHKNRLILPFWQVVRYSDSRGRGVVGVLQADFVQPTHNKQDFEKTSLFQKLEVRLKEMTWEYWDCHCRLIGYRENYPLRPSVKKPTGVDKPVTLSKSSSPVVNSKIAYGNSELKMTTLQSTSVQGSNKRKTDEVIDIQKLKKHAMEENVTGVGFSQDKQVTAIPADQVVDEEAMNLMEENKKLRAKCVEYEQAEEELNLKATKLRSEIQEAHEEYNRLLALLQSLDVKNE* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0260 690 Coils Coil 633 688 - -
Dod09g0260 690 MobiDBLite consensus disorder prediction 69 93 - -
Dod09g0260 690 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 158 250 - -
Dod09g0260 690 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 12 683 IPR045261 GO:0016887
Dod09g0260 690 Gene3D - 133 346 IPR036890 -
Dod09g0260 690 MobiDBLite consensus disorder prediction 38 93 - -
Dod09g0260 690 Pfam Morc6 ribosomal protein S5 domain 2-like 385 523 IPR041006 -
Dod09g0260 690 MobiDBLite consensus disorder prediction 53 68 - -
Dod09g0260 690 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN 12 683 - -
Dod09g0260 690 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 156 359 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0260 Dod-Chr9 3854163 3871317 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0260 - - gmx:100795667 1024.23