Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0258 ATGAAACTCTCATTGGTACATTCTAAAATGGGTTCAATCTGGATGTGCCATTTCTTTCTATTAGTTACCATACTGCATACTGTTTTTGTTACAACTCAAGGCCAAAATGAAGCAGATTCCTATTGGCTTCTAAGAATTAAGTCAGAACTGGTTGATCCATTAGGAGCCTTAAGCAATTGGTCTCCAACAACTCGTGTGTGCAGCTGGAATGGACTAACATGTGCAGTTGATCAGACACATGTTGTAGGCTTGAATCTGTCTGGCTCAGGAATATCAGGTTCCATCTCAGTTGAGTTCAGCCACCTCATTTTTCTTCAAGCACTTGATTTGTCTTCAAATTTCCTTACTGGCTGCATCCCTTCTGAGCTTGGACGGCTTCAAAATCTAAGAGTATTGCTACTGTACTCAAATAACCTATCTTGTAACGTTCCTTCAGAGATAGGTAATTTGAACAAGTTGCAAGTTCTTAGATTAGGAGATAACTTGCTGACAGGTGAAATTTCACCTACTATTGGAAACTTGAGTGAGTTGACAGTGTTGGGGATAGCCAATTGCAACTTAAATGGGAGCATACCTGCTGAGATTGGTAACTTGAAGCATCTAACATCTCTTGATTTGCAAGTAAACAGTCTTAATGGCCTCATACCTGAAGAGATTCAAGGCTGTGAAGAGCTCCAAAACTTTGCAGCATCAAACAACATGCTTGAAGGAAGCATACCCTCCTCTATGGGGTCTCTCAAATTATTGAAAATTCTGAATCTGGCAAATAATAGTCTATCTGGTTCAATCCCTGCACCATTGAGTAGTCTCTCCAGCTTGACATACCTGAATTTGCTTGGAAACAAACTGAATGGTGAAATTCCTTCAGAGCTTAACAGTTTAAGCCAGCTACAGAAGCTTGACTTGTCCAGAAACAACTTTTCTGGATCACTAACTCTCCTCAATACCAAATTACAGAATCTTGAAACTTTGGTTCTGTCAGATAATGCTTTAACAGGTAGTATACCAAGTAACTTCTGCCAAAAAGGCTCAAAACTTCAACAACTTTTCTTGACTAGGAATGAGTTTTCTGGAAGGTTTCCATTGGAGCTACTCAACTGCTCCTCAATCCAACAGCTAGACCTTTCTGGTAATAGCTTTGAAGGGGAACTTCCATCCAGTTTGGACAAACTACAAAACCTCACAGATATTGTATTCAACAACAACAGCTTCACTGGATCTCTACCCCCAGAAATTGGTAACATTACTACCTTGGAAGGTCTTTTCCTGTTTGGTAACTTTTTTACAGGAAAGATCCCTTTTGAGATAGGAAGGCTTCAAAGATTGAACACCATTTACCTCTATGATAACCAGATGTCTGGTCCTATACCAAGGGAGTTAACAAACTGCACAAGCTTAAGGGAAATTGACTTCTTTGGAAACCATTTTTCAGGTCCCATTCCAGAGACAATTGGTAAGCTCAAGGACTTGGTTGTTCTCCATTTAAGGCAGAATGAGTTGTCAGGTCCAATTCCACCTAGCATGGGGCACTGTAGAAGGCTACAGTTGTTGGCACTAGCAGATAACAAGTTTTCAGGTTCCATACCACCCACATTCAGTTACCTTTCAGAACTTAGTACAATTACCCTTTACAACAACTCATTTGAAGGACTTCTCCCAGGTTCACTCTCTCTTCTCAAAAGCCTGAAGATCATCAATTTTTCCAACAACAACTTCAGTGGAAGTATATCTCCTCTCACTGGTTCAGATTCTCTTACTGTTTTGGACTTGACCAACAACAGCTTCTCAGGTGCAATCCCGTCTAATCTAGCCAAGTCTACTGACCTCATCCGAATTCGGCTGGCACAGAATTACCTTACAGGAACCATTCCTTCTGAATTATGCCAGCTCACAATGCTCAACTTTCTTGATTTATCCTTCAACAATCTAACAGGAGATGTGCCACCTCAACTCTCAAAATGCCAGAAAATTCAACACCTTCTCCTGAATAATAACAGATTCACAGGCAAAATATCTGCATGGTTGGGAAGCTTAAAAGAACTCGGTGAACTAGATCTCTCATTCAATAATTTCCATGGAATGGTACCTGCTGAGATAGGTGACTGCTCAAAACTACTAAAGCTTTCTCTCCACCACAACAAACTCTCAGGTGAAATCCCCAAAGAGATTGGAGATCTAACCTCTCTCAATGTTTTGAACCTGCAAAGTAACAACCTCTCTGGCCTCATTCCATCAACAATTCAGCGATGCACAAAGCTCTATGAGCTCAGGCTCTCAGAAAACTCCCTAACTGGTACTATACCAGTTGAGCTAGGAGGGGTGACTGAGTTACAAGTCATATTGGACTTGAGCAGAAACCTCCTTTCTGGCGAGATTCCATCATCTCTTGGAAATCTCATGAAGCTAGAAAGACTTGATCTTTCTCTCAATCAGCTTCAAGGGGAAGTTCCCTCTTCACTTGGTAAACTCACCAGCTTGCATGTGCTAAACCTCTCAAACAACCATCTACAAGGCCAGATTCCTTCAACCTTTTCAGGGTTCCCAATTAGCTCATTTCTGAATAATGACCACTTGTGTGGCCCACCATTAGTGTTGTGCTCAGAATCCGAGGGTAAGGAGCAAATGCAGATGTCAAACACCCAAGTGGCAGCAATCATAGTTGCCATAGTTTTTACTTCCACAGTGATATGCTTAGTGATGTTCTATGTGATGTTGAGAATATGGTGCAACTATAGAAAAGTGGCTATATCAAGTGCAGATGGTGGTGGTGTAGTTGAGCAGAAGAGGGAAGAGGGTAGACGGGGCATTGCTGATCACAAGACAAGGAATGGAGAGTACTGGAATATGAATTCTTTGGGTTGA 2862 0.4133 MKLSLVHSKMGSIWMCHFFLLVTILHTVFVTTQGQNEADSYWLLRIKSELVDPLGALSNWSPTTRVCSWNGLTCAVDQTHVVGLNLSGSGISGSISVEFSHLIFLQALDLSSNFLTGCIPSELGRLQNLRVLLLYSNNLSCNVPSEIGNLNKLQVLRLGDNLLTGEISPTIGNLSELTVLGIANCNLNGSIPAEIGNLKHLTSLDLQVNSLNGLIPEEIQGCEELQNFAASNNMLEGSIPSSMGSLKLLKILNLANNSLSGSIPAPLSSLSSLTYLNLLGNKLNGEIPSELNSLSQLQKLDLSRNNFSGSLTLLNTKLQNLETLVLSDNALTGSIPSNFCQKGSKLQQLFLTRNEFSGRFPLELLNCSSIQQLDLSGNSFEGELPSSLDKLQNLTDIVFNNNSFTGSLPPEIGNITTLEGLFLFGNFFTGKIPFEIGRLQRLNTIYLYDNQMSGPIPRELTNCTSLREIDFFGNHFSGPIPETIGKLKDLVVLHLRQNELSGPIPPSMGHCRRLQLLALADNKFSGSIPPTFSYLSELSTITLYNNSFEGLLPGSLSLLKSLKIINFSNNNFSGSISPLTGSDSLTVLDLTNNSFSGAIPSNLAKSTDLIRIRLAQNYLTGTIPSELCQLTMLNFLDLSFNNLTGDVPPQLSKCQKIQHLLLNNNRFTGKISAWLGSLKELGELDLSFNNFHGMVPAEIGDCSKLLKLSLHHNKLSGEIPKEIGDLTSLNVLNLQSNNLSGLIPSTIQRCTKLYELRLSENSLTGTIPVELGGVTELQVILDLSRNLLSGEIPSSLGNLMKLERLDLSLNQLQGEVPSSLGKLTSLHVLNLSNNHLQGQIPSTFSGFPISSFLNNDHLCGPPLVLCSESEGKEQMQMSNTQVAAIIVAIVFTSTVICLVMFYVMLRIWCNYRKVAISSADGGGVVEQKREEGRRGIADHKTRNGEYWNMNSLG* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0258 953 Pfam Leucine Rich Repeat 371 391 IPR001611 GO:0005515
Dod09g0258 953 Pfam Leucine Rich Repeat 825 847 IPR001611 GO:0005515
Dod09g0258 953 Gene3D Ribonuclease Inhibitor 35 185 IPR032675 -
Dod09g0258 953 PRINTS Leucine-rich repeat signature 823 836 - -
Dod09g0258 953 PRINTS Leucine-rich repeat signature 633 646 - -
Dod09g0258 953 SUPERFAMILY L domain-like 579 854 - -
Dod09g0258 953 SUPERFAMILY L domain-like 352 649 - -
Dod09g0258 953 SMART LRR_typ_2 318 342 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 246 270 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 823 846 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 726 749 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 535 558 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 678 702 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 487 511 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 774 799 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 630 654 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 559 583 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 198 221 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 294 317 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 102 126 IPR003591 -
Dod09g0258 953 SMART LRR_typ_2 150 174 IPR003591 -
Dod09g0258 953 Gene3D Ribonuclease Inhibitor 291 577 IPR032675 -
Dod09g0258 953 Gene3D Ribonuclease Inhibitor 578 875 IPR032675 -
Dod09g0258 953 Pfam Leucine rich repeat N-terminal domain 38 74 IPR013210 -
Dod09g0258 953 Gene3D Ribonuclease Inhibitor 186 290 IPR032675 -
Dod09g0258 953 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 345 487 - -
Dod09g0258 953 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 476 904 - -
Dod09g0258 953 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 391 778 - -
Dod09g0258 953 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 396 - -
Dod09g0258 953 SUPERFAMILY L domain-like 38 336 - -
Dod09g0258 953 Pfam Leucine rich repeat 728 788 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0258 Dod-Chr9 3833367 3836714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0258 52 768 Receptor kinase-like Gene Family AT5G46330 38.536 4.28e-129 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0258 - - gmx:100802757 1407.89