Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0248 ATGGCTCCTCCAAGCTTAACAAAAAATGCTGCCTTAGAAGTAATGGGCGTCGTGGACGGTAAGAAACCCTTGTCCATAACCTTAGAAGGGTCAAATTTTCTTGCCAATGGCCACCCTTTCCTCACGGAAGTTCCACCTAACATAGTAGCCACCCCATCACCCTTTCACTCCTCAAAATCCATTGATGCAAAGAACACAGTCGGTTGCTTCGTGGGGTTCGACGCCACCGAACCCAAAAGCCGCCACGTGGCTCCCCTTGGCAAGCTTAAAGACATTAGGTTCATGAGCATATTCAGGTTCAAGGTGTGGTGGACCACACACTGGGTTGGAAGCAACGGGCACGAGGTGGAGCATGAAACCCAAATGATGATGTTGGACAGAAATGAGTTTGGGCGCCCCTACGTTTTGCTACTTCCAACCCTTGAAGGGTCCTTCCGAGCCTCCCTCCAACCTGGTTTGGATGATTACGTGGACGTCTGCGTGGAGAGTGGGTCCACGCGTGTGCGTGGGTCCACATTCAGGAGCTGCTTGTACATCCACGTGGGCGATGACCCTTACCGTTTGGTCAAAGAGGCCTTGAAGGTCATTCGAGTCCACTTGGGGAGCTTCAAGCTTCTTGAAGAGAAAACCCCACCAGGTATCGTGGACAAGTTTGGTTGGTGCACATGGGATGCATTTTACTTGAAGGTGCACCCGAAAGGGGTGTGGGAAGGGGTGAAGGGCCTTGTGGAGGGTGGGTGCCCTCCAGGGATGGTCTTAATCGATGATGGGTGGCAATCAATTTGCCACGATGATGACCCCATCACGGAACAAGGAGGCATGAACCGAACCTCCGCAGGGGAGCAAATGCCCTGCAGGCTCATAAAATTCGATGAGAATTACAAGTTTAGGGACTACACTAGCCCCTCCGGGGTGCCCTCCGAGAAAGGGATGGGTGCCTTTGTTAAGGACCTGAAGGAGCAGTTTAAGAGCGTGGAGCACGTGTATGTGTGGCATGCGCTTTGCGGGTATTGGGGTGGGATAAGACCCAATGTGAAGGGCATGCCCGAGGCTAAGGTTGTTACCCCGAAGCTCTCACCAGGGTTGCACATGACAATGGAGGATCTTGCGGTGGATAAGATCGTGAACAATGGGGTGGGTTTGGTCCCACCGCACCTAGCACACGACATTTATGAGGGCTTGCACTCCCATTTGGAATCGGTGGGCATTGATGGTGTCAAAGTTGATGTCATACATTTGCTTGAGATGTTATCCGAGGAATATGGCGGCCGTGTTGAGCTGGCCAAAGCTTACTACAAAGCACTTACCGCTTCGGTGAAGAAGCATTTCAAAGGCAACAGAGTAATTGCTAGCATGGAACATTGTAATGACTTCTTTCTTCTGGGCACAGAAGCTATAGCACTTGGTCGCGTAGGGGATGATTTTTGGTGCACTGATCCCTCTGGTGATCCAAATGGAACGTATTGGCTGCAAGGGTGTCACATGGTGCACTGTGCCTACAACAGCTTGTGGATGGGGAACTTCATTCAGCCAGATTGGGACATGTTCCAGTCCACTCACCCCTGTGCCGAATTCCATGCCGCCTCAAGAGCCATCTCCGGCGGACCGATTTACGTCAGTGATTGCGTTGGACAGCACAACTTCAAGCTGCTCAAGAGCCTTGTTTTGCCTGACGGCTCCATCTTGCGTTGCCAACATTATGCACTTCCCACACGAGACTGCTTGTTTGTAGACCCATTGCATGACGGCAAAACAATGCTCAAAATTTGGAATCTCAACAAGTACACGGGAGTGTTAGGACTATTTAACTGCCAAGGAGGAGGATGGTGCCCTGTGACACGACGAAACAAGAGTGCCTCTGAATTCTCGCACACTGTGACATGCTCAGCCAGTCCTAAAGATATTGAATGGAGCAACGGTGGTAAAAGCCCAATGTGCATCAAAGGGGTGGATGTCTTTGCTGTGTACTTATTGAAGGATGACAAGCTGAAGCTTATGAAGCCCTCTGACAAGTTGGAAGTATCACTTGAACCTTTCAGTTTCGAGCTAATGACAGTGTCCCCAGTGAGGGTGTTGTCCAAGAAGCTAATTCAATTTGCTCCAATTGGCTTAGTAAACATGCTTAACTCTGGTGGTGCCATTCAGTCCCTTGTGTTTGATGAGCATGCAAGCTGCAGGGTCAAAATTGGGGTGAGGGGTTGTGGGGAGATGAGGGTGTTCGCATCAGAGGAGCCAGTTTGTTGCAAGATAAATGGGGTGGATGTGGATTTTGATTACGAGGATAAAATGGTGAGGGTCCAAGTTCCATGGCCTAGTTCTAATTCAAACTTGTCAGTTGTTGAGTATTTGTTTTTGGGGTCACTCAATGCTAAAAGTTTCAGTAAATAA 2388 0.4983 MAPPSLTKNAALEVMGVVDGKKPLSITLEGSNFLANGHPFLTEVPPNIVATPSPFHSSKSIDAKNTVGCFVGFDATEPKSRHVAPLGKLKDIRFMSIFRFKVWWTTHWVGSNGHEVEHETQMMMLDRNEFGRPYVLLLPTLEGSFRASLQPGLDDYVDVCVESGSTRVRGSTFRSCLYIHVGDDPYRLVKEALKVIRVHLGSFKLLEEKTPPGIVDKFGWCTWDAFYLKVHPKGVWEGVKGLVEGGCPPGMVLIDDGWQSICHDDDPITEQGGMNRTSAGEQMPCRLIKFDENYKFRDYTSPSGVPSEKGMGAFVKDLKEQFKSVEHVYVWHALCGYWGGIRPNVKGMPEAKVVTPKLSPGLHMTMEDLAVDKIVNNGVGLVPPHLAHDIYEGLHSHLESVGIDGVKVDVIHLLEMLSEEYGGRVELAKAYYKALTASVKKHFKGNRVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGQHNFKLLKSLVLPDGSILRCQHYALPTRDCLFVDPLHDGKTMLKIWNLNKYTGVLGLFNCQGGGWCPVTRRNKSASEFSHTVTCSASPKDIEWSNGGKSPMCIKGVDVFAVYLLKDDKLKLMKPSDKLEVSLEPFSFELMTVSPVRVLSKKLIQFAPIGLVNMLNSGGAIQSLVFDEHASCRVKIGVRGCGEMRVFASEEPVCCKINGVDVDFDYEDKMVRVQVPWPSSNSNLSVVEYLFLGSLNAKSFSK* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0248 795 Gene3D Aldolase class I 212 554 IPR013785 -
Dod09g0248 795 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED 4 784 - -
Dod09g0248 795 Pfam Raffinose synthase or seed imbibition protein Sip1 29 766 IPR008811 -
Dod09g0248 795 PANTHER - 4 784 IPR008811 -
Dod09g0248 795 SUPERFAMILY (Trans)glycosidases 212 565 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0248 Dod-Chr9 3709294 3716279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0248 1 784 Glycoside Hydrolase AT5G40390 65.743 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0248 K06617 - gmx:100800308 1358.58