Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0235 ATGGTGAGGTTGTCTGTGTGTGTGTTGGAAGCAAAGGACCTTCCCGTGAAGGACTCTTATGTGAAGCTTAAGCTTGGGAAGTTTAAGTCCAAGACTAGGATATTGAGGAACGCTTGCAACCCCGTTTGGAATGAGGAGTTTGCTTTCAGGGTGCATGATTTGGAGGAAGTGCTTGTTGTATCTGTTGTTAATCACAGTGATGAGTTGAGGGTCATCAATAGTTCTGCTGCAGATTTTGTGGGTGAGGTGCGGATTCTTGTAGGTTCAATTGCTTCTGCGGATAAGCAGACCTTGCCACCTACTTGGTTCTCTCTTGAAAGTCCCAAGAGTGGGAAATTTTTCAACAAAGATTGTGGGAAAATTCTCCTTACTATTTCTCTTCATAGTAAGGGCCATTTCAATCACACAAGTTCTCCAAACTTCACTGTTGGAATTGAGGACTCAAAACACTTGGAAGGTCCACAAGTTTCATCTCAATCCCATTCTAATAAAATGGGTGAAGGCAAACAATTGCTGAAGGTAATAGCTAGTCGTCTAGATAGGATTTTCAACAAGAAAGATGGAAACTCACAAGAGGAGGATTCTTCAGAACCATCAACTTTTTTATCCGATTCTGAAGATTGTGTACAGGAAAATTCATCTTGTAGCTTTGAAGAAGCCATTGCACTGATGGAGTCAGGAGATAACAAACCAGAAATGCCTGAAAATTTGCAGGGTGGTGTTCTGGTGGATCAGATTTATGCAGTATCTCCATACGATCTCAATGTATTTCTTTTTGCACCCAATTCACAGTTTAGGAAAGATTTAGCAGAAATTCAGGGTACAACAAATGTTCAAGAGGGGCCTTGGACATGGAAACCTGGAGACATGCTGTGTTTGTTGCGAGTTGTTTCCTATACAAAGGCTGCTTCAAAACTAGTCAAGGCTATTAATGCCACTGAGGAGCAAACCTATGTTAGAGTGGCTAAAGATGAATTTGCTGTAATTGTTAGTGTAAGTACGCCTGAGGTCCCATATGGGAATACATTTCGGGTTGAATTGCTTTACAAGATAATGCCAGGAGGAGAGCTATCTTCTGGAGAGAAATCCTCACATCTTGTGATATCCTGGGGCATTGTCTTCCTACAAAGCACAATGATGAAAGGAATGATAGAAGGGGGAACTCGGCAAGGATTGAAGGAGAGTTTTGACGAGTTCGCCAACCTACTTGCTCAAAGTTTTAAGGTGCTAGATTCCACAGATGTAACAGACAAGGAACACTTGTTGGCAACTTTGCATACAGAAGACCAGTGGAATTGGTGGCTGGCAATCAAATACTTTTCGAATTTCACAGTAATTTTCACCTTTTTTATGCTTTTGTATGTCTTGCTGCATATGTCACGGTGCGATCCAAGTGAACCTCGGGGCTTGGAATTCAAGGGGCTTGAATTGCCAGATAGCTTTGGAGAGCTTGTTACAAGTGCAATTTTAATCTTCCAATTGCAGCGTGTTTTCAATATGGTCTCTCACTTTGTGCAAGCTAGATATCAAATGGGAACTGACCATGGCCTAAAAGCCAATGGTGATGGATGGGTTGTTACAGTGGCGTTAATAGAGGCTGTTGACTTGGCATCAATGGAGACAACAGGGTTGTCAGACCCCTATGTTGTTTTCACTTGCAATGGGCAAACAAGGTCAAGCTCTGTGAAGCTTCAAACGTCTGAGCCTCAATGGAATGAGATATTGGAGTTTGATGCTATGGAAGAACCACCATCAGTTTTATATGTGGAAGTTTTTGATTTTGATGGTCCATTTGATCAGGATGTTTCACTAGGACATGCTGAGATCAATTTCCTGAAGCACACATCAACAGAATTGGCAGACATGTGGGTTTTGCTGGAAGGAAAACTTGCTAAGTCTGCTCAATCAAAGTTGCATTTGAGGATTTTCTTGGACAATAATAAGGGGGTTGAAACAATTAAAGAATATTTGGAGAGGATGGAAAAGGAAGTAGGCAAAAAGTTGAATCTTCGGTCACCTCAACAGAATTCTACATTCCAGAAATTATTTGGGTTGCCTCCGGAAGAATTTCTAATCAAAGATTTCACATGTTACCTGAAGAGAAAAATGCCTGTGCAGGGAAGGATGTTTCTTTCGGCAAGGATTCTGGGGTTTTATGCCAATTTTTTTGGTCATAAAACTAAATTTTTCTTCCTTTGGGAAGATATTGAAGACATACAGGTGCTTCCTCCATCATGGGCATCAGTAGGTAGCCCTACATTGGTCATAATTCTGCGAAGAGATCGAGGACTTGATGCAAGGCATGGTGCGAAGACTCTAGATGAAGAAGGAAGACTTAGGTTCCATTTTCAATCATTTGTGTCATTTAGTGCTGCCTCCAGAACAATCCGGGCCTTGTGGAGAGCAAGAACATTGAACCCATACCAGAAAGGGTTACTTAGTGAAGAGCATGAAGATCAAGAAGAAGGCTTTGTAATTCCTGAAGACTCTGAATATATGCTGGAAAATGAAGGAAAAATGTCCAAGATTTATTCTGCAGAACTTCCAACTCAGATGAGATCTATGATGGGAATATTTGATGGAGGAAACCTGGAGCATAGAATTATGCAGAGAACAGGATGTATGAACTATGAAACTACTGCCTGGGAATCAGTAAAGCCTGATGTCTTCGAAAGGCGCATTTCTTACAAATTCAACCGGCATGTGTCTGTTTTTGGTGGTGAAGTCACATGCACACAACAAAAGCTTCCAAATGCAAACACTGGTGGCTGGATTGTGAATGAGGTTATGGCTCTTTATGGTGTCCCATTTGCTGATCACTTCCGTATTCATTTTAGGTATGAAATTGAGAAATCTGCTCTTGGTGACTGTGCTTGCAAGTGTGATGCATACATTGGCATTACATGGCTGAAGAGCTCTAAGTTTCAGCAAAGGATCAACAGGAACATAACAGCCAAGTTTACCATTCGAGTGAAGGAAATATTTGAGCTGGTTCAGAAAGAGATCTTGTTGATGTCTCATAACTCAAATGGGTGA 3036 0.413 MVRLSVCVLEAKDLPVKDSYVKLKLGKFKSKTRILRNACNPVWNEEFAFRVHDLEEVLVVSVVNHSDELRVINSSAADFVGEVRILVGSIASADKQTLPPTWFSLESPKSGKFFNKDCGKILLTISLHSKGHFNHTSSPNFTVGIEDSKHLEGPQVSSQSHSNKMGEGKQLLKVIASRLDRIFNKKDGNSQEEDSSEPSTFLSDSEDCVQENSSCSFEEAIALMESGDNKPEMPENLQGGVLVDQIYAVSPYDLNVFLFAPNSQFRKDLAEIQGTTNVQEGPWTWKPGDMLCLLRVVSYTKAASKLVKAINATEEQTYVRVAKDEFAVIVSVSTPEVPYGNTFRVELLYKIMPGGELSSGEKSSHLVISWGIVFLQSTMMKGMIEGGTRQGLKESFDEFANLLAQSFKVLDSTDVTDKEHLLATLHTEDQWNWWLAIKYFSNFTVIFTFFMLLYVLLHMSRCDPSEPRGLEFKGLELPDSFGELVTSAILIFQLQRVFNMVSHFVQARYQMGTDHGLKANGDGWVVTVALIEAVDLASMETTGLSDPYVVFTCNGQTRSSSVKLQTSEPQWNEILEFDAMEEPPSVLYVEVFDFDGPFDQDVSLGHAEINFLKHTSTELADMWVLLEGKLAKSAQSKLHLRIFLDNNKGVETIKEYLERMEKEVGKKLNLRSPQQNSTFQKLFGLPPEEFLIKDFTCYLKRKMPVQGRMFLSARILGFYANFFGHKTKFFFLWEDIEDIQVLPPSWASVGSPTLVIILRRDRGLDARHGAKTLDEEGRLRFHFQSFVSFSAASRTIRALWRARTLNPYQKGLLSEEHEDQEEGFVIPEDSEYMLENEGKMSKIYSAELPTQMRSMMGIFDGGNLEHRIMQRTGCMNYETTAWESVKPDVFERRISYKFNRHVSVFGGEVTCTQQKLPNANTGGWIVNEVMALYGVPFADHFRIHFRYEIEKSALGDCACKCDAYIGITWLKSSKFQQRINRNITAKFTIRVKEIFELVQKEILLMSHNSNG* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0235 1011 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Dod09g0235 1011 Gene3D - 675 802 IPR011993 -
Dod09g0235 1011 PANTHER BNAA05G37250D PROTEIN 2 1008 IPR044511 -
Dod09g0235 1011 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 524 648 IPR035892 -
Dod09g0235 1011 CDD C2 4 105 - -
Dod09g0235 1011 ProSiteProfiles C2 domain profile. 505 624 IPR000008 -
Dod09g0235 1011 ProSiteProfiles VASt domain profile. 839 1002 IPR031968 -
Dod09g0235 1011 Gene3D C2 domain 507 644 IPR035892 -
Dod09g0235 1011 ProSiteProfiles VASt domain profile. 238 411 IPR031968 -
Dod09g0235 1011 Pfam C2 domain 525 624 IPR000008 -
Dod09g0235 1011 Pfam C2 domain 3 104 IPR000008 -
Dod09g0235 1011 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 133 IPR035892 -
Dod09g0235 1011 SMART C2_3c 525 624 IPR000008 -
Dod09g0235 1011 SMART C2_3c 3 99 IPR000008 -
Dod09g0235 1011 Gene3D C2 domain 2 130 IPR035892 -
Dod09g0235 1011 MobiDBLite consensus disorder prediction 185 204 - -
Dod09g0235 1011 CDD C2 526 626 - -
Dod09g0235 1011 PANTHER C2 AND GRAM DOMAIN-CONTAINING PROTEIN 2 1008 - -
Dod09g0235 1011 SMART gram2001c 677 743 IPR004182 -
Dod09g0235 1011 Pfam VAD1 Analog of StAR-related lipid transfer domain 843 983 IPR031968 -
Dod09g0235 1011 Pfam VAD1 Analog of StAR-related lipid transfer domain 242 391 IPR031968 -
Dod09g0235 1011 Pfam GRAM domain 678 745 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0235 Dod-Chr9 3481855 3486996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0235 1 131 Lipid Metabolism Gene Families AT1G22610 32.374 2.54e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0235 - - gmx:100811103 1628.22