Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0193 ATGGCGGAGGAGCCAATGGAACCAAAGCTTGCAATTGCAGAAGACGCAGAAGATGCGTCGAAGTCGAACAAGAGTCTGAACCCTACGAAGCTCGTCGTTTTGGCCGACCTCAACGTCGATCCTCCCGACGACGACGACAGCAACATTAACATCAACAACAACGATTCCTCCTCCTCCTCCCATCTTCCTCCTCCTCCTCCTCCACCGCCACCTATCACCAGGTTGACAAATGATGAAAACAGTCAAGATAAGAGTATGTTGTCCAAAGACAGTGATAGCATTGAGGGTGAAGGTAAAAAGTTGAACAAATTGGGGAAATGCCGCTCCAGACTTAACAAGACAGATTCTTCTCTTGATTGTGGAGCTGATGCAGATGGTGATCAACATGTTCAAGGTGCTCCTTCCTCTCGGGAGGAGAAAGTTAGCAGCATGAAAACTGGCTTGGTTCATGTTGCAAGGAAGATGCCTAAAAATGCTCATGCTCATTTTATACTTGGCTTGATGTACCAAAGATTAAGCCAACCTCAAAAGGCTGTATTAGCTTATGAGAAGGCATCTGAGATCTTACTCAAGTCTGAGGCTGAGGTTGATAGGCCAGAGTTGCTTTCGTTAGTTCAGATTCACCATGCACAGTGCCTGATACTAGAAAGTTCATCAGAAAATAGTTCAGATAAAGAACTAGAACCTGACGAACTGGAGGAAATTCTTTCTAAACTGAGAGAATCAGTGCAGTCAGATATCAGACAGGCAGGCCTATGGAATACGCTAGGTTTTATCCTCCTTAAAAGTGGTCGCGTCCAGAGTGCTATCGCAGTTTTGTCATCATTATTGGCCACTGCATCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTTATCTTCAAACTGGGAATTTGGAATTATCTGCTAAATGTTTCCAAGAGTTGATCCTGAAAGATCAAAACCATCCTGCAGCTTTAGTCAATTATGCTGCCCTTCTTTTGTGTAAACATGCTTCAGTTGTAGCAGGTGCTGGTGCAAGTGCTGCTGAAGGTGCTTTCGCAGATCAAGCTATGGCTGTTAATGTTGCTAGGGAATGTTTGTTAACTGCTATTAAAGTGGATGGTAAATCAGCCCATATCTGGGCAAATCTTGCTGATGCATTTTCTATGAGTGGTGATCATCGAAGTTCCAGCAAATGCTTGGAGAAGGCGGCAAAACTGGAACCCAATTGCTTGTCTACTCGATATTCTGTTGCTATCCATCGAGTAAAGGACGCAGAAAGATCTCAAGATCCCAGTGAGCTGCTTTCATGTGCTGGAAACGAGATGGCTTCTATAATTAGGGATGGCGATTCATCACTGGTTGAGCTTCCAATAGCATGGGCTGGGCTGGCCTTGGTTCACAAGTCTCAGCATGAGATAGCAGCAGCATATGAAAGTGAACATCATGAGTTGGAGGTTGAAGAACGCAGTGTTATCTGTTTAAAGCAGGCCATAGCAGAAGATCCAGATGATGCTGTGCAGTGGCTCCAACTTGGCCTGCATAGTCTTTGTGCTCGGCAGTTCAAAACATCTCAAAAGTACCTCAAAGCTGCTGTTGCCTGTGACAGGGATTGCAGCTATGCATGGTCTAACCTAGGTGTGTCACTTCAACTATCAGAAGAACCATCACAAGCTGAAGAAGTATACAAGAAGGCTTTGTCTTTGGCAACTACTCAACAAGCCCACGCCATATTATCCAACTTGGGAATCCTCTATCGTCACCGGAAACAGTATCAACGTGCCAAGGCAATGCTTACAAAGTCACTTGAACTTAAGCCCGGCTATGCTCCTGCATTTAACAATCTAGGTCTTGTATTTGTTGCTGAGGGTCTTTTGGAAGAGGCCAAGTATTGTTTTGAAAAGGCCCTCCAATCAGACCCCTTGCTTGATGCAGCCAAGTCCAACTTGATTAAGGTGGTTTCCATGTCAAAGTTATGTAGAGGCCTCTCTTCATGCCATGTTAAAGAATGA 1998 0.4469 MAEEPMEPKLAIAEDAEDASKSNKSLNPTKLVVLADLNVDPPDDDDSNININNNDSSSSSHLPPPPPPPPPITRLTNDENSQDKSMLSKDSDSIEGEGKKLNKLGKCRSRLNKTDSSLDCGADADGDQHVQGAPSSREEKVSSMKTGLVHVARKMPKNAHAHFILGLMYQRLSQPQKAVLAYEKASEILLKSEAEVDRPELLSLVQIHHAQCLILESSSENSSDKELEPDELEEILSKLRESVQSDIRQAGLWNTLGFILLKSGRVQSAIAVLSSLLATASENYDCLGNLGIAYLQTGNLELSAKCFQELILKDQNHPAALVNYAALLLCKHASVVAGAGASAAEGAFADQAMAVNVARECLLTAIKVDGKSAHIWANLADAFSMSGDHRSSSKCLEKAAKLEPNCLSTRYSVAIHRVKDAERSQDPSELLSCAGNEMASIIRDGDSSLVELPIAWAGLALVHKSQHEIAAAYESEHHELEVEERSVICLKQAIAEDPDDAVQWLQLGLHSLCARQFKTSQKYLKAAVACDRDCSYAWSNLGVSLQLSEEPSQAEEVYKKALSLATTQQAHAILSNLGILYRHRKQYQRAKAMLTKSLELKPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALQSDPLLDAAKSNLIKVVSMSKLCRGLSSCHVKE* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0193 665 Gene3D Tetratricopeptide repeat domain 87 335 IPR011990 GO:0005515
Dod09g0193 665 ProSiteProfiles TPR repeat profile. 605 638 IPR019734 GO:0005515
Dod09g0193 665 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 18 663 - -
Dod09g0193 665 Pfam Tetratricopeptide repeat 260 319 - -
Dod09g0193 665 MobiDBLite consensus disorder prediction 116 142 - -
Dod09g0193 665 SMART tpr_5 535 568 IPR019734 GO:0005515
Dod09g0193 665 SMART tpr_5 284 317 IPR019734 GO:0005515
Dod09g0193 665 SMART tpr_5 501 534 IPR019734 GO:0005515
Dod09g0193 665 SMART tpr_5 571 604 IPR019734 GO:0005515
Dod09g0193 665 SMART tpr_5 250 283 IPR019734 GO:0005515
Dod09g0193 665 SMART tpr_5 453 486 IPR019734 GO:0005515
Dod09g0193 665 SMART tpr_5 373 406 IPR019734 GO:0005515
Dod09g0193 665 SMART tpr_5 159 192 IPR019734 GO:0005515
Dod09g0193 665 SMART tpr_5 605 638 IPR019734 GO:0005515
Dod09g0193 665 Pfam Tetratricopeptide repeat 159 188 IPR019734 GO:0005515
Dod09g0193 665 Pfam Tetratricopeptide repeat 605 636 IPR019734 GO:0005515
Dod09g0193 665 Pfam Tetratricopeptide repeat 373 406 IPR019734 GO:0005515
Dod09g0193 665 MobiDBLite consensus disorder prediction 45 59 - -
Dod09g0193 665 SUPERFAMILY TPR-like 153 329 IPR011990 GO:0005515
Dod09g0193 665 Pfam Tetratricopeptide repeat 537 601 - -
Dod09g0193 665 ProSiteProfiles TPR repeat profile. 535 568 IPR019734 GO:0005515
Dod09g0193 665 Gene3D Tetratricopeptide repeat domain 345 486 IPR011990 GO:0005515
Dod09g0193 665 Gene3D Tetratricopeptide repeat domain 487 570 IPR011990 GO:0005515
Dod09g0193 665 MobiDBLite consensus disorder prediction 60 74 - -
Dod09g0193 665 Gene3D Tetratricopeptide repeat domain 571 649 IPR011990 GO:0005515
Dod09g0193 665 ProSiteProfiles TPR repeat profile. 571 604 IPR019734 GO:0005515
Dod09g0193 665 SUPERFAMILY TPR-like 453 648 IPR011990 GO:0005515
Dod09g0193 665 MobiDBLite consensus disorder prediction 1 21 - -
Dod09g0193 665 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 18 663 - -
Dod09g0193 665 MobiDBLite consensus disorder prediction 83 98 - -
Dod09g0193 665 SUPERFAMILY TPR-like 357 415 IPR011990 GO:0005515
Dod09g0193 665 MobiDBLite consensus disorder prediction 1 98 - -
Dod09g0193 665 ProSiteProfiles TPR repeat profile. 373 406 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0193 486 637 Glycosyltransferase AT3G04240 24.183 1.31e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0193 - - adu:107478871 1046.96