Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0183 ATGCTCAAATCAACCTTCACTCCCATTTTCTGGGTGCTTGCCCCAAAGCCCAGATCACCAAAACTAGCATCCCACGTAATCACCAGCACCTTATTAACAAACAGCACTCCACTTGTTCGACAAAACGCCTCTCACAAGCACCACCACCACCCCGTCATCACCCCTTCTTCAGCATACGTTCACCTCCCCTTCTGCAGAAAACGCTGCTTCTACTGTGATTTCCCCATCGTCGCTCTTGGCTCCTCTTCAACCAAAATAGACGACGACCCGCGAGTCCTAAACTACATACAATGGCTCTGCAGAGAAATCAGTGCAACGAAGGTGGAACTTGATGATGCAAAGACACCCCTTGAAACTGTCTACTTTGGTGGTGGAACACCCTCCCTTGTTCCCCCGAGGATGGTTTCCTTGGTTTTGGATACTTTAAGGATGAGGTTTGGGTTGAGTGAAGATGCCGAAATATCAATGGAAATGGACCCGGGAACTTTTGATGCTAAGAAGATGAAGGAGATGATGCTGTTGGGAGTGAATAGAGTGTCTTTGGGAGTTCAAGCATTTCAGGATAAGCTTTTGAAGGATTGTGGGAGGGCACATGGTCTAAGAGAGGTTCATGAGGCTATTGATATTATCAAGCTGTGTGGGGTTGAGAATTGGAGTATTGATCTTATAGCTTCACTTCCCCATCAGACAGGTGATATGTGGGAGGAGAGTCTGAGGCTCACCATTGAGGCTCAACCAACTCATGTTTCTGTATATGATTTGCAAATTGAGCAGGGGACAAAATTTGGAGCCTTAATGATTGGAGGCTCTTATAATGATCGGAAACCTGATCATGGGATTGTTTGCAGGTATACACCAGGGGAATTTCCACTGCCTTCTGAGATACAGTCAGCAGATTTCTATAAGATGGCCTCGAGGATGCTTTCTGATGCCAGTTATAACCATTACGAAATCAGCAGCTATTGTAAGAGTGGATATGAGTGCAAGCACAACTTTGCCTATTGGAAGAACAAGCCATTCTATGGCTTTGGCCTCGGCTCTGCTAGTTTTATTGGTGGGCTGAGGTATTCAAGACCGAAGAAGGTGAATGATTACATGAGGTTTGTGGAAAATTTGGAAAATGGATTAGTGAATAGCTCTGGTAAGGGCCATATTCATGGCAAGGACACAGCCATGGATGTCGTGATGCTGTCCTTAAGAACTGCAAGAGGGCTAGACCTCAAATGTTTCCAAGAATCATATGGCAGCTCTGTTGTTTTATCTCTTCTTGAGGCTTACAAGCCTTATGTTGAGAGTGGACATGTGGTTTGTTTGGATGAGAAGAGGAGAACCATTAGAATAGATGACCTCAACAATTCTCTACTGGATGAAACTAACACAGAAAGGAGGCTGGCCTATATACGGTTAAGTGACCCAGAAGGTTTCCTCTTATCAAATGAGTTAATATCCCTTGCTTTTGGGGTTATTGACTCCTCCAATGATTGCCCTCCGCACTTGGAGGTTGTGTAA 1509 0.4493 MLKSTFTPIFWVLAPKPRSPKLASHVITSTLLTNSTPLVRQNASHKHHHHPVITPSSAYVHLPFCRKRCFYCDFPIVALGSSSTKIDDDPRVLNYIQWLCREISATKVELDDAKTPLETVYFGGGTPSLVPPRMVSLVLDTLRMRFGLSEDAEISMEMDPGTFDAKKMKEMMLLGVNRVSLGVQAFQDKLLKDCGRAHGLREVHEAIDIIKLCGVENWSIDLIASLPHQTGDMWEESLRLTIEAQPTHVSVYDLQIEQGTKFGALMIGGSYNDRKPDHGIVCRYTPGEFPLPSEIQSADFYKMASRMLSDASYNHYEISSYCKSGYECKHNFAYWKNKPFYGFGLGSASFIGGLRYSRPKKVNDYMRFVENLENGLVNSSGKGHIHGKDTAMDVVMLSLRTARGLDLKCFQESYGSSVVLSLLEAYKPYVESGHVVCLDEKRRTIRIDDLNNSLLDETNTERRLAYIRLSDPEGFLLSNELISLAFGVIDSSNDCPPHLEVV* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0183 502 Gene3D tm_1862 like domain 63 272 IPR023404 -
Dod09g0183 502 PANTHER RADICAL S-ADENOSYL METHIONINE DOMAIN-CONTAINING PROTEIN 1, MITOCHONDRIAL 35 488 - -
Dod09g0183 502 SMART MiaB 55 285 IPR006638 GO:0003824|GO:0051536
Dod09g0183 502 SFLD HemN-like, clustered with heat shock genes 55 440 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Dod09g0183 502 PANTHER COPROPORPHYRINIGEN III OXIDASE 35 488 IPR034505 -
Dod09g0183 502 SFLD anaerobic coproporphyrinogen-III oxidase like 55 440 - -
Dod09g0183 502 Pfam Radical SAM superfamily 60 240 IPR007197 GO:0003824|GO:0051536
Dod09g0183 502 SUPERFAMILY Radical SAM enzymes 44 440 - -
Dod09g0183 502 ProSiteProfiles Radical SAM core domain profile. 50 311 IPR007197 GO:0003824|GO:0051536
Dod09g0183 502 TIGRFAM hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 57 429 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0183 - K07739 gmx:100779022 770.77