Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0167 ATGACACCAACTGTACCTATTGAGTTTTCTGGGCAAAAGGAATCCAGGCAGTACTCTCGTTCACACACAATGGGGAAGTCTCGGAAGTACTCCAAAGGGTATGCTACTGGCTTTGTTCCCGATTTCCGTCATGCGGTGGAGACTATGGGTGAATCAGATGGGTTGGGTAGCTCTGGAAGGGTCGATACAGAGCTGACAGCGTCGGCGAATTCCTGTGCGCCGAAAAGGAAGCGCCCTGGGTTGAATGCCTATGGCTATGGTGGTGGTTTTGATGTTCCGTATCAACATTTCTCATTGTCAAAGATGTCAAGTTCTGAGAGGAAGGACTTGAAACTTAGATTAACATGGGAACTTCAACAGGTAAGGGATCTCCAGAAGAAAGTTGAGAGTATGAATTCAAATTTGATTGCATCGTCTCCCCCTAGTGACATACGGAGCTGCAGTGCGGGACAGAAAAGACCTCAGCTGGAGAGCCAGTACAGAACACCAGGACCTTCGGCGCCACAGGGTAAAAAAAGGCCGTTACCAGGACATAGTGGTCCGAAGACAAAGAGAAGTATGTCTGGACATTTTGAACAAGCAAAACCTACTGCTTCTTCGAATGCTGCGTTGATGAAATCGTGTGAGAATTTACTTAACCGTTTGATGTCTCATCAGTTTGGTTGGGTTTTCAACACCCCAGTTGATGTTGTTAAATTGAACATTCCGGATTATTTCAGTGTCATCAAACATCCAATGGATTTGGGTACTGTAAAGAGTAGACTGACTTCTGGTAAATATTCAAGTCCTATGGAATTCGCTGCAGACGTGCGGCTGGCTTTTTCAAATGCGATGACCTATAATCCACCTGGAAATGATGTACACATTATGGCAGAGACCCTCAGTAAATTTTTTGAAGCAAGGTGGAAGCCTATAGAGAAGAAAATTCCTGCCATTGATAGTGTCCCATCTAAGCCATCAAAACCCACTGCTCGTGTGGAAACTGAAATTTCTGACCGAATTCCTTCCACAAAAAAGAATAAAATCACCCCAAATGAAACTAAAATGAAGACAGAGCCTGTGAAAAGAGTGATGACAGATGAGGATAAGCATAAATTGAGTATGGAGTTGGAGGCAATGCTTGGAGAGTTGCCTGAAACCATTGTTGATTTCTTGAAAGAACAAAGTTATGATTCGGGTCAAACAAATGATGATGAAATTGAGATTGATATTGATGCACTAAGTGATGATACCTTATTCAAGTTGCGGAAGCTTCTTGATGATTATGTGCTGGAGAAGCAAAAACTTCAGGCCAAAATTAGACCGGGTGAAACGGAGCTTCCGAATGAATCTGGCTTTAGCAATTCATCAATGCAACCACGCAAAGGCAATGAACAAGTTGAGGAAGATGTGGACATTGTAGGAGGGAATGATCCTCCAGTTTCAAATTATCCCTCAGTAGAGATTGAGAAAGATGGTGCCAACAGAAACATTAAATGCAGTAGTTCAAGTAGCTCCAGTGGTGAATCTGGCTCTTCTTCCAGTGATTCGGACTCAGGTAGTTCATCTGATAGCGAGTTAGATACTGCCAAAGCATCAGAACCTGTTAGTGCTACCAAGGAAAATGTAGGATCTGTTTTGACTTCCCATGAAAACAAAGGGGATCCTGGTAATTCTGAATCTGGAAAGGATTCAGTTAATGTGGGTGGTCAAGTTGATCAGGATTCCCAGACTAAGCCAGTGACTTTTGAACCGGAAAGCCATCAAGAGGGGGAGAGTGCTCCACCTCAGAGGCAAGTCTCTCCTGACAAGCTCTACCGGGCAGCTTTATTAAGGAGCCGGTTTGCTGACACTATACTTAAAGCTCAAGAAAAAGCCCTTGAAAAGGCTGAAAAGCTGGATCCTGAAAAACTTAGGCTAGAGCGAGAAGAACTTGAAAGACGACAGAAGGAAGAGAAAGCTCGGTTGCAAGCGGAGGCAAAGGCTGCAGAAGATGCTCGGAGGAAAGCTGAAGCAGAAGCTGCTGCTGAAGCCAAGAGGAGGAGGGAACGGGAGAGAGAAGCAGCACGCCAAGCTTTGCAAAAGATGAAGAAAACTGTTGACATCAATGAGAGCAGTCAATTTTTGGAAGATCTGGAGATGCTGAGTGTTGTACAAGGTGAACATTTTCCAAGTTTCAAAGAGGAGACAAGCCCGGATCATCCCCAGAGTGGATTGGGTAGTTTCAAGCTACAGGGAAATCCCTTAGAACAGCTAGGATTGTACATGAAGGATGATGATGAGGACTTGGAGGAAGAACCTCCGCAAAGTGCTGCAGAGCCATCAAAAGATATAGAGATGCCGAGTGCTTTACATGGTGAACGTTTGCCAAGTTTCAAAGAGGAGACAACAACTGATCATCCCCAGAGTGGATTGGATAGTTTCAAACTACAGGGAGGAAATGCATTGGAACAGGTAGGACTATACATGAAGGACGATGATGAAGATTTGGAGGAAGAACTGCCACAGAATGCTGCAGGGCCTTCAAATGATGTAGAAGAAGGAGAAATTGATTGA 2535 0.443 MTPTVPIEFSGQKESRQYSRSHTMGKSRKYSKGYATGFVPDFRHAVETMGESDGLGSSGRVDTELTASANSCAPKRKRPGLNAYGYGGGFDVPYQHFSLSKMSSSERKDLKLRLTWELQQVRDLQKKVESMNSNLIASSPPSDIRSCSAGQKRPQLESQYRTPGPSAPQGKKRPLPGHSGPKTKRSMSGHFEQAKPTASSNAALMKSCENLLNRLMSHQFGWVFNTPVDVVKLNIPDYFSVIKHPMDLGTVKSRLTSGKYSSPMEFAADVRLAFSNAMTYNPPGNDVHIMAETLSKFFEARWKPIEKKIPAIDSVPSKPSKPTARVETEISDRIPSTKKNKITPNETKMKTEPVKRVMTDEDKHKLSMELEAMLGELPETIVDFLKEQSYDSGQTNDDEIEIDIDALSDDTLFKLRKLLDDYVLEKQKLQAKIRPGETELPNESGFSNSSMQPRKGNEQVEEDVDIVGGNDPPVSNYPSVEIEKDGANRNIKCSSSSSSSGESGSSSSDSDSGSSSDSELDTAKASEPVSATKENVGSVLTSHENKGDPGNSESGKDSVNVGGQVDQDSQTKPVTFEPESHQEGESAPPQRQVSPDKLYRAALLRSRFADTILKAQEKALEKAEKLDPEKLRLEREELERRQKEEKARLQAEAKAAEDARRKAEAEAAAEAKRRREREREAARQALQKMKKTVDINESSQFLEDLEMLSVVQGEHFPSFKEETSPDHPQSGLGSFKLQGNPLEQLGLYMKDDDEDLEEEPPQSAAEPSKDIEMPSALHGERLPSFKEETTTDHPQSGLDSFKLQGGNALEQVGLYMKDDDEDLEEELPQNAAGPSNDVEEGEID* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0167 844 MobiDBLite consensus disorder prediction 132 198 - -
Dod09g0167 844 PANTHER TRANSCRIPTION FACTOR GTE8 778 834 - -
Dod09g0167 844 MobiDBLite consensus disorder prediction 1 18 - -
Dod09g0167 844 PANTHER TRANSCRIPTION FACTOR GTE10 25 762 - -
Dod09g0167 844 PANTHER TRANSCRIPTION FACTOR GTE8 25 762 - -
Dod09g0167 844 MobiDBLite consensus disorder prediction 620 687 - -
Dod09g0167 844 MobiDBLite consensus disorder prediction 1 32 - -
Dod09g0167 844 MobiDBLite consensus disorder prediction 723 737 - -
Dod09g0167 844 Coils Coil 412 432 - -
Dod09g0167 844 PRINTS Bromodomain signature 251 269 IPR001487 GO:0005515
Dod09g0167 844 PRINTS Bromodomain signature 269 288 IPR001487 GO:0005515
Dod09g0167 844 PRINTS Bromodomain signature 219 232 IPR001487 GO:0005515
Dod09g0167 844 PRINTS Bromodomain signature 235 251 IPR001487 GO:0005515
Dod09g0167 844 SUPERFAMILY Bromodomain 204 310 IPR036427 GO:0005515
Dod09g0167 844 MobiDBLite consensus disorder prediction 434 597 - -
Dod09g0167 844 MobiDBLite consensus disorder prediction 620 691 - -
Dod09g0167 844 MobiDBLite consensus disorder prediction 132 165 - -
Dod09g0167 844 Gene3D - 351 430 IPR038336 -
Dod09g0167 844 Gene3D - 177 313 IPR036427 GO:0005515
Dod09g0167 844 SMART bromo_6 197 307 IPR001487 GO:0005515
Dod09g0167 844 Pfam Bromodomain 208 292 IPR001487 GO:0005515
Dod09g0167 844 MobiDBLite consensus disorder prediction 773 788 - -
Dod09g0167 844 ProSiteProfiles NET domain profile. 348 430 IPR027353 -
Dod09g0167 844 Coils Coil 633 692 - -
Dod09g0167 844 PANTHER TRANSCRIPTION FACTOR GTE10 778 834 - -
Dod09g0167 844 ProSiteProfiles Bromodomain profile. 216 288 IPR001487 GO:0005515
Dod09g0167 844 MobiDBLite consensus disorder prediction 441 455 - -
Dod09g0167 844 MobiDBLite consensus disorder prediction 489 577 - -
Dod09g0167 844 CDD Bromo_plant1 204 302 IPR037377 -
Dod09g0167 844 Pfam Bromodomain extra-terminal - transcription regulation 358 420 IPR027353 -
Dod09g0167 844 MobiDBLite consensus disorder prediction 716 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0167 Dod-Chr9 2301136 2307974 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0167 - - adu:107478848 1143.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0167 09 2301136 2307974 Dod09g0167 09 2301136 2307974 ECH