Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0145 ATGGCACCGCACGATCTCCGCCGTCCGTTCAAGCGACCGTTAATCTCCGATCAAGAGAAGCGCAGGCAACAGTCCCTGCTCCGCCAGGCACAGAATCGCCGCGACTGCTCAGCGCCACGCCCGCTTCCTCGCCTCCACTGCCTTCTCCCTCGAACAACCACCTCTCCCCGAACCCTGAACCTGCACCGGAACCCGAACCCGATCTGGAACTCGAAGACGAACCCATACCTGATTCCGAACACCCTCACTCTCCCAAAAACCTCGACGTTTGTGTTTGCTAGACCTTCTGGAAAACGTTGCTTTGTGGTTTCGTGCAACGGCACAACGATCAGTCGTTTAAAGAACGGGTCAATACTGCACCGTTTTCCCTCCGCATTGCCGAACGGTGCGAGGAAGAAGGATGTCTCTGGTCCTTCCTCGTCTTACTCCATATTGGACTGCATCTTTCACGAGACTTACTATGTGATTGACATGGTTTGCTGGCGTGGCTACTCGCTGTATGATTGCGCAGCAGGAGTTCAGGTGTACAGCTGTGACCAGAGCGGTTTGTTTGCTGCTTATTCTGCGCCGGTGCCTTATGTCAAAGACGGCCTTCTGTTTTATAACAAGCATGCACACTACCAGACAGGAATTACTCCACTGGCATTAGTTTGGAAGGATGAGAACTGTAGTCAATATGTTATGGACACTGATAGCAAAGGACAGGTTCCGAACCAGCAGCAGGTGGTTTTGGAGCTACAAGAAGATGGAAAGCTGACTACCTCTGATGATCCTCCTGTGGTATTTGGCTGTTTAGATGGAAACTTTACACAGCAGTCAGAATTGCATTCAGGATGTCTTCTACGGTTTGCGATTGGAGAAGGAGGACTGGTTTTGGCTGATGGTAAGCTTGAGAAAGCTGATCTAAATTATCTTAGCAAGGCCAATCGAGCTCGTGCTTCTGCTGATAGTTTCTCAAAGGTTATGTTCCAATACAGTGTTCGGCATTCTCCCCTTAGAATTGATGATTTGTTAGGATCTGTCAGCACACCAGCTGATGATGGAAGCAAAGCTTGTGATATTGAGATGGATGGTTGA 1077 0.4968 MAPHDLRRPFKRPLISDQEKRRQQSLLRQAQNRRDCSAPRPLPRLHCLLPRTTTSPRTLNLHRNPNPIWNSKTNPYLIPNTLTLPKTSTFVFARPSGKRCFVVSCNGTTISRLKNGSILHRFPSALPNGARKKDVSGPSSSYSILDCIFHETYYVIDMVCWRGYSLYDCAAGVQVYSCDQSGLFAAYSAPVPYVKDGLLFYNKHAHYQTGITPLALVWKDENCSQYVMDTDSKGQVPNQQQVVLELQEDGKLTTSDDPPVVFGCLDGNFTQQSELHSGCLLRFAIGEGGLVLADGKLEKADLNYLSKANRARASADSFSKVMFQYSVRHSPLRIDDLLGSVSTPADDGSKACDIEMDG* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0145 358 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 53 219 - -
Dod09g0145 358 MobiDBLite consensus disorder prediction 1 22 - -
Dod09g0145 358 CDD Snurportin-1_C 90 221 - -
Dod09g0145 358 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 173 357 IPR017336 GO:0005634|GO:0005737|GO:0061015
Dod09g0145 358 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 89 171 IPR017336 GO:0005634|GO:0005737|GO:0061015
Dod09g0145 358 Gene3D DNA ligase/mRNA capping enzyme 76 172 - -
Dod09g0145 358 Gene3D DNA ligase/mRNA capping enzyme 173 246 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0145 K13151 - gmx:100801927 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0145 09 2124943 2128665 Dod09g0145 09 2124943 2128665 ECH