Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0139 ATGGCGGCCACCACCATCACTTCAAGAACCCCCTTTCCTTCTCCATCTTCATCTTCATACATCAGCTTCCAAAAACGCATTCTCAGATCCAACCTCCCATTCTCCCCCATTCTCTACTACAAGAAGAAACCCCATTCCCTCAAAATCTCAAGCTCCCTCACAAATCCTACCCCTAAACCCCTGCATCAACCTCAACCGCCCGCAGCCGCAGCCACCGCCGCCGCCACCACCCCCGCCACCAACATTAGCCGTCCTCCCTCCGGGGAGCCCCGGAAAGGCGCCGACATCCTTGTGGAGGCCCTGGAGCGTGAAGGAGTGACCACCGTCTTCGCCTACCCCGGCGGCGCGTCGATGGAGATCCACCAGGCCCTGACGCGCTCCGCCGTGATCCGCAACGTCCTCCCCCGCCACGAGCAGGGTGGCGCATTCGCCGCCGAGGGCTTCTCACGCGCCACCGGGCTCCCCTGCGTCGTCATCGCCACCTCCGGCCCCGGCGCCACCAACCTCGTCTCCGGCCTCGCCGACGCCATGATGGACAGCGTTCCCATCGTCGCCGTCACCGGCCAGGTTCCCCGCCGCATGATCGGCACCGACGCCTTCCAAGAAACCCCAATCGTCGAAGTCACAAGATCGATCACGAAGCACAATTACCTCGTCCTTGATGTCGATGAAATCCCTAGAACCGTGAAAGAAGCCTTTTTTATAGCCACTAGCGGAAGACCTGGACCTGTGTTAATCGATGTTCCAAAAGATGTTCAGCAGCAATTGGCTGTTCCCAATTGGGATAGGCCAATTAGGATTAATGGGTATGTTTCTAGGTTGCCAAAGGTTCCATCTTTGGTTGAATTGGAGAGTGTTGTGAGGTTGGTTTTCGAGGCTAAGAAACCGGTTTTGTATGTTGGTGGTGGGTGTTTGAACTGTAGTGATGAGTTGAGCAGGTTTGTGGAGATTACTGGTGTACCTGTTGCTACTACTTTGATGGGTCTTGGTGTTTACCCTAGTGACGGTGAGTGTTCTCTTCAGATGTTGGGGATGCATGGTACTGTTTATGCTAACTACGCTGTTGATAAGAGTGATTTGTTGCTTGCTTTTGGGGTTAGGTTTGACGACCGTGTCACTGGGAAGCTTGAGGCTTTTGCTAGTAGGGCTAAGATTGTTCACATTGACATTGATCCTGCTGAGATTGGAAAGAACAAGCTCCCACACGTGTCGATCTGTGCGGATTTGAAGGTGGTGTTGGAAGGGATTAATGGGATTTTGGAGAGCAGAGGGGTTAAGGGGAAGCTTGATCTTAAGGATTGGAGGGAAGAGTTGAATGTGCAGAAACAGAAGTTCCCATTGGGTTATAAGACTTTTGGGAACCTAATTTCCCCTCAGTATGCTATTCAGGTTCTTGATGAGCTCACAAATGGGGATGCTATTATTAGTACTGGGGTTGGACAGCATCAGATGTGGGCTGCTCAGTTTTACAAGTACAAGAGGCCTAGGCAGTGGTTGACATCAGGGGGTCTTGGTGCTATGGGTTTTGGGTTGCCTGCTGCCATTGGTGCCGCTGCAGCTAACCCCGGTGCAGTTGTGGTTGACATTGATGGGGATGGTAGCTTCATCATGAATGTGCAAGAGTTGGCCACTATAAGGGTGGAGAACCTCCCTGTCAAGATCTTGTTGCTGAACAACCAGCACTTGGGTATGGTTGTTCAGTGGGAGGACAGGTTCTACAAGTCTAACAGGGCTCACACATATCTGGGAGACCCTTCTAATGAGGCAGAGATATTCCCAAACATGTTGAAGTTTGCCGACGCTTGTGGGATACCGGCAGCTCGTGTGACAAAGAAGGAAGAACTTAGAGCAGCAATCAAGAAGATGTTGGACACCCCTGGCCCTTACCTTCTTGATGTCATAGTGCCCCATCAGGAGCATGTCTTGCCGATGATCCCAAGTAATGGATCCTTCAAGGATGTGATAACTGAGGGTGATGGCAGAACTAGTTATTGA 1995 0.5203 MAATTITSRTPFPSPSSSSYISFQKRILRSNLPFSPILYYKKKPHSLKISSSLTNPTPKPLHQPQPPAAAATAAATTPATNISRPPSGEPRKGADILVEALEREGVTTVFAYPGGASMEIHQALTRSAVIRNVLPRHEQGGAFAAEGFSRATGLPCVVIATSGPGATNLVSGLADAMMDSVPIVAVTGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDEIPRTVKEAFFIATSGRPGPVLIDVPKDVQQQLAVPNWDRPIRINGYVSRLPKVPSLVELESVVRLVFEAKKPVLYVGGGCLNCSDELSRFVEITGVPVATTLMGLGVYPSDGECSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDPAEIGKNKLPHVSICADLKVVLEGINGILESRGVKGKLDLKDWREELNVQKQKFPLGYKTFGNLISPQYAIQVLDELTNGDAIISTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAAANPGAVVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVVQWEDRFYKSNRAHTYLGDPSNEAEIFPNMLKFADACGIPAARVTKKEELRAAIKKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGRTSY* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0139 664 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 87 267 IPR029061 -
Dod09g0139 664 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 456 655 IPR029061 -
Dod09g0139 664 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 92 656 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Dod09g0139 664 Gene3D - 82 274 - -
Dod09g0139 664 PANTHER ACETOLACTATE SYNTHASE 60 663 - -
Dod09g0139 664 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 92 255 IPR012001 GO:0030976
Dod09g0139 664 CDD TPP_AHAS 456 647 IPR039368 GO:0030976
Dod09g0139 664 Pfam Thiamine pyrophosphate enzyme, central domain 284 414 IPR012000 GO:0000287|GO:0030976
Dod09g0139 664 CDD TPP_PYR_POX_like 95 250 - -
Dod09g0139 664 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 478 633 IPR011766 GO:0003824|GO:0030976
Dod09g0139 664 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 60 663 IPR045229 -
Dod09g0139 664 ProSitePatterns Thiamine pyrophosphate enzymes signature. 515 534 IPR000399 GO:0000287|GO:0030976
Dod09g0139 664 Gene3D - 283 447 - -
Dod09g0139 664 Gene3D - 448 634 - -
Dod09g0139 664 SUPERFAMILY DHS-like NAD/FAD-binding domain 282 446 IPR029035 -
Dod09g0139 664 MobiDBLite consensus disorder prediction 49 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0139 Dod-Chr9 2077811 2080551 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0139 K01652 - gmx:100782250 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0139 09 2077811 2080551 Dod09g0139 09 2077811 2080551 ECH