Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0123 ATGGCGGCAACTTGCAACATCGGGTTACAATTTCCCGGGAATCTGAGCAATGCAAAGAGGAAGAAAATTGTGTACGAGGCAGGGGAGGTTTTGAAGCTTAGTAGCTCTTACTCTTCGTGTAACACAAGCATGTTGAATAATAAACGAAGATTATCAATATCATTGTTGGTGAATGCAAGTTCTCATGGTACTAGTAGTAGTGGAATGCAGGTTGAAAAGTTGGAAAGTGAAAGCGCAGCAGATACAGCTCTTGTAACCATCTTTCGGGGAAGATTTGTTGAGGGCAGGTTTGTATATAGGCAGATTTTTGCTATCAGGTGTTACGAAACTGGACCAGATAAAACTGTCACCATTGAGGCGCTCATGAATTTTCTTCAGGAAACAGCTCTAAATCATGTCCCCAGCTGTGGGATAGGTGGGAATGATTTTGGAGGAACACGGGAGATGAGCCTTCGGAATCTCATTTGGGTTGTTACACGCATGCAGGTTCAAGTACACAGATATAACAAATGGGGAGATGAAATAGAGGTTGATACTTGGTTTGATGCTGCTGGAAAGAATGGAATGCGAAGAGATTGGATAATCAGGGATCAGTACACCAAAGAGATCTTAGCAAGGGCAACAAGCACATGGGTGATCATGAATAAGGAAACAAGAAGATTGTCCAAGATACCTGAAGAAGTTAAACAAGAGGTTGCCCCTTTCAACTTTAATAGGCTTGCAATTGCTAGTGAAGAAACAGATAGTAAAAGGGTACACAAGCTCACTGATGACAGTGCTGAGAAAGTTAGATCCGGAATGGCTCCAGGGTGGAGTGACATGGATGCTAACCAGCACGTTAACAATGTGAAATACATTGGATGGATTTTAGAGAGTGTGCCAAAAGAAGTGTTGGAGAATTATAATATGGCAAGCATAACTTTGGAGTTTAGGCGTGAATGCATGTATTCAAATTTGTTGGAGTCCATGACTAGTCCAACAGAGAGGGTGATAGGTGCCTCAAGTACTGATTCCATCAGCAGAAAACCAGACTTGCAATATACACACCTGCTTCGCCTTCAAGATGATAAATCAGAGTTAGTCCGAGCTAGAACAGAATGGCATTTTAAGCAAAATAAAAAGTGA 1125 0.4178 MAATCNIGLQFPGNLSNAKRKKIVYEAGEVLKLSSSYSSCNTSMLNNKRRLSISLLVNASSHGTSSSGMQVEKLESESAADTALVTIFRGRFVEGRFVYRQIFAIRCYETGPDKTVTIEALMNFLQETALNHVPSCGIGGNDFGGTREMSLRNLIWVVTRMQVQVHRYNKWGDEIEVDTWFDAAGKNGMRRDWIIRDQYTKEILARATSTWVIMNKETRRLSKIPEEVKQEVAPFNFNRLAIASEETDSKRVHKLTDDSAEKVRSGMAPGWSDMDANQHVNNVKYIGWILESVPKEVLENYNMASITLEFRRECMYSNLLESMTSPTERVIGASSTDSISRKPDLQYTHLLRLQDDKSELVRARTEWHFKQNKK* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0123 374 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 29 373 IPR045023 GO:0006633|GO:0016297
Dod09g0123 374 Pfam Acyl-ACP thioesterase 98 368 IPR002864 GO:0006633|GO:0016790
Dod09g0123 374 Gene3D Hotdog Thioesterase 90 373 - -
Dod09g0123 374 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 29 373 - -
Dod09g0123 374 CDD 4HBT 97 215 - -
Dod09g0123 374 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 257 368 IPR029069 -
Dod09g0123 374 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 97 239 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0123 Dod-Chr9 1841157 1843370 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0123 90 370 Acyl Lipid Metabolism Gene Families AT1G08510 54.804 1.19e-104 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0123 K10781 - gmx:100791281 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0123 09 1841157 1843370 Dod09g0123 09 1841157 1843370 ECH