Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0121 ATGATGGAATACCCGAAAGACCCGAATTCGAACCCGGGTGGGACCGACGACTCAGATTCAGAGCTCGAACTCTACACCATCCCAAGCTCTTCAAGATGGTTCGCGTGGGACGAAATCCACGACACAGAGAGAATAACTCTGAAGGAATTCTTCGACGGGAGCTCGATGTCGCGGTCCCCGAAGATCTACAAGGAGTACAGGGACTTCATCATCAACAAGTACAGGGAAGACCCTACGAGGAAGCTCACTTTCACCGAGGTCAGGAAATCCCTCGTCGGTGACGTCACGCTCCTCCGCAAGGTCTTCCTCGCGCTGGAGAGCTGGGGGCTCATCAACTACGGCGCGCCCACCGGTGGGGACGCTGCGGCGGAGGAGGAGGAGGAAGAGGATGGGGAAGAAGAGAGGTGGAAGGTTAAGGTGGAGGAAGGTGCGCCCAACGGGATCCGCGTGGTGGCAACGCCCAACTCGCTGAAGCCGATTTCGCTGCCACGTGGCACCAAGACGAGTAAGCATGCGGGTTCGGGTTCGGGTTCGGGTTCGGTTGGTCTGAAATTGCCGCCGCTGGCGTCGTACTCGGATGTTTACGGCGATTTGATGAGGAAGAAGGAGGTGAAGTGTGGGCTTTGCGGTGACAAAATTGATTCTGGACACTACCGAAGTACCAAGGATAATTTCATTATTTGTGCACAATGTTTCAAAAATGGGAATTATGGGGAGAAAAGGTCTGCGGAGGATTTCACATTGAGTGAGTCCAGTGAAAATAGTGGCAAACAGGGAGCTGTCTGGACTGAGGGAGAAACTCTTCTCCTTTTAGAATCTGTTTTGAAGCATGGTGATGACTGGGAACAAGTTGCTCAAAGTGTTCAAACCAAGACTAAACTTGATTGTATCTCAAAACTCATTGAGCTGCCTTTTGGGGAGCTCATGTTGGGCTCTGCTTACAGAAATGGTAGTAGTAATAGTGCAAATGGCTTCATGAACAATGCAAAACAAGTTCAGCCATCGTCATCTGATAATCAAGAAACTTCAAAGACACAGGATCAATCACCTGAGCTTGCAAATGAAAATGAGCAGAATGGTGATGCTGTGCAGGAAAGTCCTTCAAAAAGACAGCGTGTTGCTGCTCTTTCAGATTCCAGCAGTTCACTGCTGAAGCAGGTGGGACTTATCTCTACAGTGGTTGACCCTCATATCACTGCTGCTGCAGCTGATGCTGCTGTTACAGCACTTTGTGATGAGAACTTGTGTCCAAGGGAGATATTTGATGCTGAAGAGGGTTATGCTTCTAGTGTGAACTCTCTGAATAATTCAGCAAGAGCCGTTGGTGGTGAAGGTGTAGAGATGGAAAGGTCCTCTGAGTCAGAAATAGATGACAGAGGCCAAAAGGACAGCATACCTTTAACACTGCGTATAAGAGCTGCCATTGGAACTGCTCTTGGAGCTGCCGCTGCTCGAGCAGAGTTGTTAGCGGACCAGGAAGACAGAGAGATTGAACATTTAGTCGCAACCATAATTGAAGCCCAGATTAAGAAATTGCAACACAAAGTTAAACATTTTGACGATCTGGAGCTGCTGATGGAAAAGGAACACACTGAAATAGAGGTGCTTAAAGATTCTATCTTGACTGAACGGATTGATGTATTAAGGAAGACGTTTAGATCTGGAATCACCAGATGGAAAGATTATTCTTATGTAAAATCTTAG 1704 0.4806 MMEYPKDPNSNPGGTDDSDSELELYTIPSSSRWFAWDEIHDTERITLKEFFDGSSMSRSPKIYKEYRDFIINKYREDPTRKLTFTEVRKSLVGDVTLLRKVFLALESWGLINYGAPTGGDAAAEEEEEEDGEEERWKVKVEEGAPNGIRVVATPNSLKPISLPRGTKTSKHAGSGSGSGSVGLKLPPLASYSDVYGDLMRKKEVKCGLCGDKIDSGHYRSTKDNFIICAQCFKNGNYGEKRSAEDFTLSESSENSGKQGAVWTEGETLLLLESVLKHGDDWEQVAQSVQTKTKLDCISKLIELPFGELMLGSAYRNGSSNSANGFMNNAKQVQPSSSDNQETSKTQDQSPELANENEQNGDAVQESPSKRQRVAALSDSSSSLLKQVGLISTVVDPHITAAAADAAVTALCDENLCPREIFDAEEGYASSVNSLNNSARAVGGEGVEMERSSESEIDDRGQKDSIPLTLRIRAAIGTALGAAAARAELLADQEDREIEHLVATIIEAQIKKLQHKVKHFDDLELLMEKEHTEIEVLKDSILTERIDVLRKTFRSGITRWKDYSYVKS* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0121 567 MobiDBLite consensus disorder prediction 155 180 - -
Dod09g0121 567 SMART sant 258 306 IPR001005 -
Dod09g0121 567 PANTHER BRAHMA ASSOCIATED PROTEIN 155 KDA 23 558 - -
Dod09g0121 567 MobiDBLite consensus disorder prediction 321 374 - -
Dod09g0121 567 ProSiteProfiles SANT domain profile. 257 308 IPR017884 -
Dod09g0121 567 ProSiteProfiles Myb-like domain profile. 254 296 IPR001005 -
Dod09g0121 567 ProSiteProfiles SWIRM domain profile. 25 122 IPR007526 GO:0005515
Dod09g0121 567 Pfam SWIRM-associated region 1 477 551 IPR032451 -
Dod09g0121 567 CDD SANT 262 299 IPR001005 -
Dod09g0121 567 PANTHER SWI/SNF COMPLEX-RELATED 23 558 - -
Dod09g0121 567 Pfam SWIRM domain 28 113 IPR007526 GO:0005515
Dod09g0121 567 Gene3D - 258 306 - -
Dod09g0121 567 SUPERFAMILY Homeodomain-like 258 309 IPR009057 -
Dod09g0121 567 MobiDBLite consensus disorder prediction 1 21 - -
Dod09g0121 567 MobiDBLite consensus disorder prediction 159 176 - -
Dod09g0121 567 Gene3D - 31 117 IPR036388 -
Dod09g0121 567 Pfam Myb-like DNA-binding domain 262 300 IPR001005 -
Dod09g0121 567 SUPERFAMILY Homeodomain-like 31 114 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0121 Dod-Chr9 1756198 1760163 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0121 K11649 - gmx:100790238 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0121 09 1756198 1760163 Dod09g0121 09 1756198 1760163 ECH