Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0114 ATGCCGGAAGAGGAGTTGGTGGACATAAAGTTCAGGTTGTCCGATGGCTCCGATTTGGGACCCTTCAGGTACTCTTCAGCCGCCACCGTAGATGTTCTCAAGCAAAGGGTTGTCTCCGATTGGCCCAAAGGTAAAACAATCGTCCCAAAGGCAGCAAATGAAGTGAAGTTGATTAATTCTGGTAAAATATTGGAAAACAACAAGACTGTTGGTCAGTGTAGAGTTCCATTTGGTGATTTTGCTGGGGGAGATATAATAATGCATGTTGTTGTACAGCCATCTCTTGCAAAGACTAAAGCTGGTCAATGTCAATGTTTGTGGCTTCATAACTTGCTGGACAATGTTATGTTTTTGTTTCAAGTGGAATCTTCCTTTTCCCCTGTTTGGAGCGGTTGTTGGTAA 402 0.4328 MPEEELVDIKFRLSDGSDLGPFRYSSAATVDVLKQRVVSDWPKGKTIVPKAANEVKLINSGKILENNKTVGQCRVPFGDFAGGDIIMHVVVQPSLAKTKAGQCQCLWLHNLLDNVMFLFQVESSFSPVWSGCW* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0114 133 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 102 IPR040015 -
Dod09g0114 133 CDD Ubl_MUBs_plant 6 93 - -
Dod09g0114 133 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Dod09g0114 133 Gene3D - 1 100 - -
Dod09g0114 133 SUPERFAMILY Ubiquitin-like 2 97 IPR029071 -
Dod09g0114 133 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 102 IPR039540 -
Dod09g0114 133 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0114 Dod-Chr9 1672207 1676883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0114 - - lang:109362185 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0114 09 1672207 1676883 Dod09g0114 09 1672207 1676883 ECH