Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0112 ATGACCATACACGCAGAAACTTTGGCTTTTGTTTTCGGCCTTCTAGGCGACGGCATCTCCTTTATCGTATTCCTTTCTCCAGCGCCAACTTTTTACCGAATCTACAAGAAGAAGTCCACAGAAGCATTTCAGTCACTTCCATACATCGTCGCACTGTTCAGTGCAATGCTTTGGATTTATTACGCACTCGTCAAAGGGCATCATACTATTCCTATCCTCATCATTAACTCCTTTGGGTGCGTGATAGAGCCAATTTACCTTGCCATCTTCCTAATTTATGCCCCAAATAAGACAAGGCTTTCGACCATTAAGACTATTCTCTTGTTGAATGTGTTTGGCTTCGGAGTTATGCTTCTGTCAACCATCTACCTGACAACAGGATCCAATCGTCTTAAAGTTATAGGATTGCTTACCCTGGTCCTCAACATAATCGTGTTTGCTGCTCCTCTTGCCAGTTTGAGACGCGTCATAAAGACCAAGAGCGTGGAATTCATGCCAATTAGTTTGTCTTTCTTTTTGACCTTGAACGCGGTCATGTGGTTCTTCTTTGGTTTTCTCGAGAATGACTACAACATTGCCGTCCCAAATACCATTGGGTTTCTATTCGGCATAATTCAAATGGTGCTGTATGTGATGTATAGAAACAACAAGAAAGTGATACTAGAGGAGCCAGTGAAGCCTCAAGAACTAAATGGCCATATCATAGACGTTGGGAAGCTGAGCACAATGGCACCCTCCGACACCAATCATGAAGCCAAAGATGTTGCCGTGACTGTGGCAACTGTTGAGGATTCAAATGGAAAGCAAGAGACAGGAAATGATAGCCATAAGAAGATGATGGTGAATACAGATTCCGCTAGCAAAGTGTGA 870 0.431 MTIHAETLAFVFGLLGDGISFIVFLSPAPTFYRIYKKKSTEAFQSLPYIVALFSAMLWIYYALVKGHHTIPILIINSFGCVIEPIYLAIFLIYAPNKTRLSTIKTILLLNVFGFGVMLLSTIYLTTGSNRLKVIGLLTLVLNIIVFAAPLASLRRVIKTKSVEFMPISLSFFLTLNAVMWFFFGFLENDYNIAVPNTIGFLFGIIQMVLYVMYRNNKKVILEEPVKPQELNGHIIDVGKLSTMAPSDTNHEAKDVAVTVATVEDSNGKQETGNDSHKKMMVNTDSASKV* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0112 289 MobiDBLite consensus disorder prediction 263 289 - -
Dod09g0112 289 PANTHER RAG1-ACTIVATING PROTEIN 1 4 258 - -
Dod09g0112 289 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 258 - -
Dod09g0112 289 Gene3D - 128 223 - -
Dod09g0112 289 Gene3D - 8 98 - -
Dod09g0112 289 MobiDBLite consensus disorder prediction 269 283 - -
Dod09g0112 289 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Dod09g0112 289 Pfam Sugar efflux transporter for intercellular exchange 133 218 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0112 Dod-Chr9 1636671 1640818 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0112 1 284 Miscellaneous Gene Families AT5G50790 43.448 2.60e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0112 K15382 - gmx:100794434 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0112 09 1636671 1640818 Dod09g0112 09 1636671 1640818 ECH