Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0085 ATGGAGAGTGCAGTGTGTTTGTGTGTTTTAATGTTGGTGGGGTGTTTCTTCACTTCCTCGGAGTCCAAGTATATAAGGTACAATACTACGTCCAGCATTGTTCCTGGGAAGCTGAATGTCCACTTGGTTGCTCACACTCACGATGATGTTGGATGGTTGAAGACCGTTGACCAGTACTATGTCGGTTCCAACAACTCCATTCAGGGAGCGTGCGTTCAAAATGTGCTGGATTCGCTGATACCAGCATTGTTGGTAGACAAGAATCGCAGGTTCATATATGTTGAGCAGGTAAGGACATATGTGAAGCGTTTTTTCCAGCGATGGTGGAGAGAACAAAGTGAAGCTGTCCAGAATACAGTCAAGCAGCTGGTCAACTCTGGTCAACTGGAGTTCATAAATGGTGGTATGGTTATGCATGATGAGGCTACTACACATTATATTGACATGATTGATCAGACAACCCTTGGACACCGATTTATCAAAGAAGAATTTGGTGTAACTCCAAGAATAGGATGGCAAATTGATCCATTTGGACATTCTGCAGTGCAGGCTTACTTGTTGGGAGCAGAGGCTGGATTTGATTCCCTATACTTTGCTCGGATTGATTACCAAGATAGAGCTAAGAGGAAAGATGAAAAATCGCTTGAAGTTGTGTGGCAGGGCTCTAAGAGCTTTGGTTCATCTGCACAAATATTTTCTGGTGCATTCCCTATGAATTATGAACCTCCCAGTAGTTTCTACTTTGAAGTAAATGACGATTCTCCTATTGTACAGGATGATGTCAATTTGTTTGACTACAATGTCCCTGAACGTGTAAATGATTTTGTTGCAGCAGCAATATCTCAGGCCAATATTACACGCACCAATCATTTAATGTGGACAATGGGGACAGATTTCAAGTACCAGTATGCGCATACCTGGTTTCGGCAAATGGACAAGCTTATTCACTATGTTAATCAAGATGGCCGGGTCCATGCCCTGTACTCAACCCCATCAAAATATACTGATGCAAAACATGTTGCAAATGAGGCCTGGCCAATCAAGACTGATGACTTCTTTCCGTATGCTGATGTCGTAAATGGCTATTGGACGGGGTATTTTACAAGTAGGCCAACTATCAAAGGTTATGTCAGATTTCTGAGTGCCTACTACTTGGCAGCAAGGCAGTTAGAGTATTTTAAAGGGAAGAGTGCCTTAGGACCTAAAACTGACTCTCTGGCTGAAGCATTGGCTATTGCTCAACACCATGATGCAGTATCTGGTACAGAAAAGCAGCATGTGGCTAATGATTATGCAAAACGACTTTCAATAGGTTACACAGAGGCTGAGAAGGTTGTTGCAGCATCACTTGCTTACTTGACAGATGCAACAAAAGCAGGTTCTCAGAGTCCGCAAGTTAAATTTCAACAGTGCCCACTTTTGAACATAAGTTACTGTCCTGCATCAGTAGTTGATTTCTCAAATGGAAAAGACCTGGTTGTTGTTGTTTACAATCCAGTGGGATGGAAAAGAGAGGATATAATAAGGATCCCTGTTGTCAATGAAAATGTTGCTGTTCGGGATTCCAGTGGAAAAGAAATCCAATCCCAGCTGATACCAATACCCAATGCTTTTATTGGTCTAAGAAACTACCACACTGAGGCATACCTGGGAGTGTCTTCAACAGTAAAACCCAAATACTGGCTCGCCTTCTCAGCAACTGTTCCTCCACTTGGTTTTAGCACTTACTATGTTTCCAATGCTAAACAAGCAGCTACTATTTCAGATACACATACAACATACAAGTCAGGAAATCAGAGTGATACAATTGAAGTGGGCTTAGGAAACTTGAAATTGATTTATTCTGCGAAGGAAGGGAAACTCACTAAATATGTCAATAGCAGAAGCAAGGTCACAGAATCTCTAGAGCAGGCATACAAATTTTATGCAGGGTATGGAAATGATGGAACACAAAATTCTCAGGCATCTGGAGCATATATTTTTCGCCCCAATGGTTCATCAGTTCCCATCAACTCCCATGGGAAGTCCCCTCTCACAGTCTTCCAGGGGCCAATTGTGCATGAAGTGCATCAGATGATCAATTCATGGATATACCAGACCACTAGACTCTACAAGGGGAAAGAGCATGCTGAAGTCGAGTTTATTGTTGGACCTATACCGATTAATGATGGAGTTGGTAAAGAAATTGCAACTGAGATCAAAACAAGTCTTGCTAGCAACAAAACCTTCTATACTGATTCCAATGGACGTGATTTTATTGAACGGATTAGAGACTACAGAAAAGACTGGGACTTGGAAGTAAATCAACCTGTTGCTGGGAATTATTACCCTATCAACCTTGGGATATACTTGGAAGATAAAAGCAAAGAGTTCTCTGTATTGGTCGATAGGTCTGTTGGGGGGTCCAGCATCATAGATGGTCAACTGGAGCTAATGGTTCATAGGAGGTTACTTGTAGATGATTCCAGAGGTGTTGGAGAGCCACTGAATGAAACAGTTTGCATCCATGATAAGTGCACTGGACTAACTGTACTAGGGAAGTACTATTTCCGAATTGATCCTGTCGGAGAGGGTGCAAGATGGCGCCGATCATTTGGTCAGGAGATATACTCACCATTTCTATTAGCCTTCACTGAGAGTGAAGGTAACTGGAAAGATTCTCATGTCACAACCTTCTCGGGAGTGGACTCCTCTTACAGCTTACCCGATAATGTTGCAATTATAACCCTTCAGGATCTGGATGACAGAAAAGTTCTCCTTCGGCTTGCACACTTATATGACATTGGCGAAGACAAGCATCTTTCAGCAAAGGCAACTGTAGAGCTTAAGAAGGTGTTCCCCAGCAAACAGGTAAACAAAATTACTGAGATGAGCTTATCAGCTAACCAAGAAAGAGCAGATATGGAGAGGAAGAGATTAGTCTGGAAAGTTGAAGGGTCACCTCAAGGTCCCCAGGTGCCAAGGGGAGGACCAGTGGATCCAGAAAAGCTAGTTGTAGAACTTGCTTCCATGGAAATAAGGACCTTTGTTATCAGTTTTAAACACTAA 3048 0.4242 MESAVCLCVLMLVGCFFTSSESKYIRYNTTSSIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSLIPALLVDKNRRFIYVEQVRTYVKRFFQRWWREQSEAVQNTVKQLVNSGQLEFINGGMVMHDEATTHYIDMIDQTTLGHRFIKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEAGFDSLYFARIDYQDRAKRKDEKSLEVVWQGSKSFGSSAQIFSGAFPMNYEPPSSFYFEVNDDSPIVQDDVNLFDYNVPERVNDFVAAAISQANITRTNHLMWTMGTDFKYQYAHTWFRQMDKLIHYVNQDGRVHALYSTPSKYTDAKHVANEAWPIKTDDFFPYADVVNGYWTGYFTSRPTIKGYVRFLSAYYLAARQLEYFKGKSALGPKTDSLAEALAIAQHHDAVSGTEKQHVANDYAKRLSIGYTEAEKVVAASLAYLTDATKAGSQSPQVKFQQCPLLNISYCPASVVDFSNGKDLVVVVYNPVGWKREDIIRIPVVNENVAVRDSSGKEIQSQLIPIPNAFIGLRNYHTEAYLGVSSTVKPKYWLAFSATVPPLGFSTYYVSNAKQAATISDTHTTYKSGNQSDTIEVGLGNLKLIYSAKEGKLTKYVNSRSKVTESLEQAYKFYAGYGNDGTQNSQASGAYIFRPNGSSVPINSHGKSPLTVFQGPIVHEVHQMINSWIYQTTRLYKGKEHAEVEFIVGPIPINDGVGKEIATEIKTSLASNKTFYTDSNGRDFIERIRDYRKDWDLEVNQPVAGNYYPINLGIYLEDKSKEFSVLVDRSVGGSSIIDGQLELMVHRRLLVDDSRGVGEPLNETVCIHDKCTGLTVLGKYYFRIDPVGEGARWRRSFGQEIYSPFLLAFTESEGNWKDSHVTTFSGVDSSYSLPDNVAIITLQDLDDRKVLLRLAHLYDIGEDKHLSAKATVELKKVFPSKQVNKITEMSLSANQERADMERKRLVWKVEGSPQGPQVPRGGPVDPEKLVVELASMEIRTFVISFKH* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0085 1015 Gene3D - 889 1015 - -
Dod09g0085 1015 PANTHER ALPHA-MANNOSIDASE 14 1014 - -
Dod09g0085 1015 SMART Alpha_mann_mid_2 361 435 IPR015341 GO:0004559|GO:0006013
Dod09g0085 1015 Gene3D - 605 871 - -
Dod09g0085 1015 Pfam Glycosyl hydrolases family 38 N-terminal domain 39 356 IPR000602 GO:0004559|GO:0006013
Dod09g0085 1015 Gene3D Glycoside hydrolase 38, N terminal domain 38 324 IPR027291 -
Dod09g0085 1015 SUPERFAMILY Glycoside hydrolase/deacetylase 27 357 IPR011330 GO:0005975
Dod09g0085 1015 Gene3D Glycoside hydrolase family 38, central domain 404 459 IPR037094 GO:0004559|GO:0006013
Dod09g0085 1015 Gene3D Glycoside hydrolase family 38, central domain 325 403 IPR037094 GO:0004559|GO:0006013
Dod09g0085 1015 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 904 1009 IPR041147 -
Dod09g0085 1015 CDD GH38N_AMII_LAM_like 38 320 - -
Dod09g0085 1015 SUPERFAMILY Families 57/38 glycoside transferase middle domain 360 454 IPR028995 -
Dod09g0085 1015 Pfam Alpha mannosidase middle domain 362 453 IPR015341 GO:0004559|GO:0006013
Dod09g0085 1015 SUPERFAMILY Galactose mutarotase-like 462 1013 IPR011013 GO:0003824|GO:0005975|GO:0030246
Dod09g0085 1015 Pfam Glycosyl hydrolases family 38 C-terminal domain 608 823 IPR011682 GO:0004559|GO:0006013
Dod09g0085 1015 Gene3D - 479 604 IPR013780 -
Dod09g0085 1015 PANTHER ALPHA-MANNOSIDASE 14 1014 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0085 Dod-Chr9 1183006 1191176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0085 1 927 Glycoside Hydrolase AT5G13980 67.701 0.0 1326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0085 K01191 - gmx:100798150 1759.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0085 09 1183006 1191176 Dod09g0085 09 1183006 1191176 ECH