Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0035 ATGCGTTCCTTTCGCAACGCGAATTCAACCCACACGCAAACCGCATCTGCTCCTTCCGCTCGGACCAACACCCCCTCCCTCTCTGCCTCTCGCTCCCTCTCCGCCTCGGACGGCTCTTCCTCCACCTCCGGCCGCCACCGTGTACAGCGGTCGATCTCCGACTCGGCAAGGTTCTCCCGCCAGAACACCGCCCGCGAGGTGGTGCTGAACGACGTGGTTGGGAATGGGATCTCGGGGATTCTGTACAAGTGGGTGAACTACGGGAGAGGGTGGAGACCGAGGTGGTTCGTGCTTCACGAAGGTGTTTTGTCGTATTATAAGATTCATGGGCACGACAAGCTTGTTCTTAACGGGGACGTGGAGAATGGGTCGAAGGTGATTGGGGAGGAGTCGCTCCGCCGCATCAACAGCCACCGCCATTGCCCCTCTCGCCACCGTAGACCCGTCAGCGAGATCCACCTCATGGTGTGTTCGGTAAGAGAGAACAAGTCAGACGAGAGGAGGTTCTCGATATGCACGGGGACGAAGAAGAGGCTGCACCTGAGGGCTGAGAGCAGGGACGACAGGGCCACCTGGTTTGAGGCCATGATGGCCGTCAAGGACATGTACCCTCGCCTCTCCAACGCCCAGATCATGGCCCCCGTCGCCTCCGTCTCCCTCTCCACCGACAAGCTCCGCCACCGCCTCCTCCAGGAGGGTCTCAGCGACGCCGCCATCCACGACAGCCAGGAAATCATGAGGGCCGAGCTCGCCCACTTGCATAAGCAGATTGTCGCCCTCAAGCACAAGCAGTTCCTACTCATTGACGCACTCCGCCATTTAGAGACAGAGAAGGTTGACCTGGAGAACACACTTGTTGAAGACCAAAAATCAAAGGATGAAGGGGATTCTTATCTGTCATCTCAGGAAAAATACAGCGATGGAAGTGCCAGTGATTCTTCTGATGAGCATGATAGGCATGATGATCACTCTGATAACGAACATGATGCATTCTTTGATACATTTGACATCCTTTCAACATGTTCTGCTATGAGCAATGGATCTGACCATATGAGATCAGGCTATGGTTCTGAATCTGAGGAGGAGGAGGATAATATTCCAAATGGAAACACTGATGCAAAGTCTCCCATAGGGTCTGTTGGATTCAACTATCCTAATGTCAAGCGAAGAAAGAAGCTTCCTGAACCTGTTGAGAAAGACAGTGGTGTCAGTCTATGGTCAATAATAAAAGACAATATAGGAAAGGATCTCACAAAGGTTTGTCTTCCAGTTTACTTCAATGAGCCCCTCTCCTCATTGCAGAAGTGTTGTGAAGATCTGGAGTACTCTTACCTTCTAGACCAAGCAAATGGATGGGGCAAAATGGGTGACAGTCTCATGAGGATGCTACATGTGGCTGCATTTGCAATTTCAGGGTATGCTAGCACTAGTGGTAGAAGTTGCAAACCATTTAATCCACTGTTGGGCGAGACATTTGAGGCGGAGTATCCAGACAAAGGCATTCGCTTTATCTCCGAGAAGGTCAGTCATCACCCCATGAGTGTTGCATGCCATTGTGAGGGCAGTGGCTGGAAATTTTGGGGTGACAGCACATTGAAAAGTAAATTCTGGGGTCGTTCAATTCAGCTTGACCCGGTTGGTATATTAAGTTTGGAGTTTGATGATGGAGAAGTCTTCCATTGGAGTAAGGTAACAACATCCATTTACAACCTCATCCTAGGAAAACTCTACTGTGACCATTATGGCACAATGAGGGTTGAGGGGAACCGTGAGTATTCTTGTAAGATCAAATTCAAGGAGCAGTCAATCATTGATAGAAACCCTCATCAGATTCACGGCATAGTGGAAGATAAGAAAGGTAAAACAGTGGCAACTCTATTTGGGAAATGGGATGAGAGCTTGCACTACGTAATTGGAGGGAACTTTGGGAAAGGAAAAGGGTCTAATTCGTCACCAAAACCACATCTTCTATGGAAGCGGAACCAGCCACCCGAGCATCAAACAAGATATAACCTTACAGAGTTTGCTATTACACTGAATGAAATCACACCTGGACTCAAGGAGAAATTGCCACCAACAGATTCAAGGCTAAGACCTGATCAAAGGCATTTAGAGGATGGAGAGCATGAAATGGCCAATTCTGAGAAGTTGCGGCTGGAACAAAGACAGCGGCAGGCAAGGAAGTTGCAAGAGAAGGGTTGGAAACCAACGTGGTTTGCTAAGGAGAAAGGCAGCAAAAGTTACCGTTATGTTGGTGGATATTGGGAAGCTAGGGAAAAGGGCAAATGGGAATCTTGTCCTGACATCTTTGGCCAACTCTCAAGTATTACTGTTGCTGAGAATAGCCCATCTTCATCATAA 2361 0.4922 MRSFRNANSTHTQTASAPSARTNTPSLSASRSLSASDGSSSTSGRHRVQRSISDSARFSRQNTAREVVLNDVVGNGISGILYKWVNYGRGWRPRWFVLHEGVLSYYKIHGHDKLVLNGDVENGSKVIGEESLRRINSHRHCPSRHRRPVSEIHLMVCSVRENKSDERRFSICTGTKKRLHLRAESRDDRATWFEAMMAVKDMYPRLSNAQIMAPVASVSLSTDKLRHRLLQEGLSDAAIHDSQEIMRAELAHLHKQIVALKHKQFLLIDALRHLETEKVDLENTLVEDQKSKDEGDSYLSSQEKYSDGSASDSSDEHDRHDDHSDNEHDAFFDTFDILSTCSAMSNGSDHMRSGYGSESEEEEDNIPNGNTDAKSPIGSVGFNYPNVKRRKKLPEPVEKDSGVSLWSIIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEDLEYSYLLDQANGWGKMGDSLMRMLHVAAFAISGYASTSGRSCKPFNPLLGETFEAEYPDKGIRFISEKVSHHPMSVACHCEGSGWKFWGDSTLKSKFWGRSIQLDPVGILSLEFDDGEVFHWSKVTTSIYNLILGKLYCDHYGTMRVEGNREYSCKIKFKEQSIIDRNPHQIHGIVEDKKGKTVATLFGKWDESLHYVIGGNFGKGKGSNSSPKPHLLWKRNQPPEHQTRYNLTEFAITLNEITPGLKEKLPPTDSRLRPDQRHLEDGEHEMANSEKLRLEQRQRQARKLQEKGWKPTWFAKEKGSKSYRYVGGYWEAREKGKWESCPDIFGQLSSITVAENSPSSS* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0035 786 Pfam Pleckstrin homology domain 82 196 - -
Dod09g0035 786 Pfam Oxysterol-binding protein 404 759 IPR000648 GO:0008289
Dod09g0035 786 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 22 775 IPR000648 GO:0008289
Dod09g0035 786 SMART PH_update 75 203 IPR001849 -
Dod09g0035 786 ProSiteProfiles PH domain profile. 74 201 IPR001849 -
Dod09g0035 786 Coils Coil 271 291 - -
Dod09g0035 786 SUPERFAMILY PH domain-like 77 207 - -
Dod09g0035 786 Coils Coil 712 732 - -
Dod09g0035 786 MobiDBLite consensus disorder prediction 287 326 - -
Dod09g0035 786 MobiDBLite consensus disorder prediction 686 718 - -
Dod09g0035 786 MobiDBLite consensus disorder prediction 348 385 - -
Dod09g0035 786 MobiDBLite consensus disorder prediction 691 718 - -
Dod09g0035 786 SUPERFAMILY Oxysterol-binding protein-like 399 778 IPR037239 -
Dod09g0035 786 MobiDBLite consensus disorder prediction 309 326 - -
Dod09g0035 786 Gene3D - 75 203 IPR011993 -
Dod09g0035 786 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 22 775 - -
Dod09g0035 786 MobiDBLite consensus disorder prediction 1 59 - -
Dod09g0035 786 Gene3D - 701 778 - -
Dod09g0035 786 Gene3D - 490 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0035 Dod-Chr9 582799 590202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0035 K20456 - gmx:100781218 1148.65