Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2333 ATGGCACAGTCTCAATCCCGACAGCATCCATGTCACTATTCAGCAGTGGATTTAGATGCAATGCGGTCTGACACACTTGAGGTGGCGGAATTCTCTGGTCTAAGATCCAGTTCATGCGTTACCTATGCCAATAAAGCCAGAGATTCTTCCTTCTCTGATGTCGTAGCTGCTGAACTCACTCCCAAGACTACGGGAAAAGCTCCTATGAGGGGAGAGACGGTTGCCAAATTGAAGGTAGCAATCAATGGTTTTGGACGCATTGGTAGAAACTTCCTCCGCTGTTGGCATGGCAGAAAAGACTCACCCTTGGATGTCATTATTGTTAATGACAGCGGTGGAGTCAAGAATATGACCAGACCATTTCAGTTGATGGTAAGCCCATCAAGGTTGTCTCAAACAGGGACCCTCTTAAGCTTCCTTGGGCTGAGCTTGGAATTGACATTGTCATCGAGGGTCTTTGTTGACGTCCCTAGTGCCGGCAAACACATCCAAGCAGGCGCCAAGAAAGTTATTATCACTGCTTCTGTAGAGGGTGCTGACATTCCAACCTACGTTGTTGGAGTAAATGAACAGAGGCTTTTAGATGCTTTGCACCGGGATTTGAGACGAGCCAGGGCTGCTGCACTGAACATAGTCCCCACAAGCACCAGAGCAGCCAAGGATGTGTCGCTAAAGGGTATCACAGCAGAAGATGTAAATGTAGCCTTCAGGAAGGCAGCTGAGGGCCCATTAAAAGGCGTATTGGACATCTGTGATGTTCGACTGGTGTCTGTGGACTTCCGTTGCACTGATGTTTCTTCCACCATTGACTCCTCCCTCACTATGGTCATAGGAGATGACATGGTCAAGGTGGTTGCTTGGTATGACATTGAATGGGGTTATAGCCAAAGACTGGTGGATTTGGCACATGTTGTAGCAAGCAAGTGGCCAGATGCGCCTGCAGCGGGAAGTGGAGACCCATTGGAGGATTACTGCAAGACAAACCCAGCTGATGAGGAATGCAAAGTTTATGAAGCTTAA 1020 0.4824 MAQSQSRQHPCHYSAVDLDAMRSDTLEVAEFSGLRSSSCVTYANKARDSSFSDVVAAELTPKTTGKAPMRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIIVNDSGGVKNMTRPFQLMVSPSRLSQTGTLLSFLGLSLELTLSSRVFVDVPSAGKHIQAGAKKVIITASVEGADIPTYVVGVNEQRLLDALHRDLRRARAAALNIVPTSTRAAKDVSLKGITAEDVNVAFRKAAEGPLKGVLDICDVRLVSVDFRCTDVSSTIDSSLTMVIGDDMVKVVAWYDIEWGYSQRLVDLAHVVASKWPDAPAAGSGDPLEDYCKTNPADEECKVYEA* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2333 339 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC 20 118 - -
Dod08g2333 339 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 222 339 IPR020831 GO:0016620
Dod08g2333 339 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 150 191 IPR020831 GO:0016620
Dod08g2333 339 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 176 289 - -
Dod08g2333 339 Gene3D - 291 301 - -
Dod08g2333 339 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC 190 224 - -
Dod08g2333 339 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 188 223 IPR020829 GO:0016620
Dod08g2333 339 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 227 288 IPR020829 GO:0016620
Dod08g2333 339 Gene3D - 75 125 - -
Dod08g2333 339 Gene3D Dihydrodipicolinate Reductase; domain 2 192 223 - -
Dod08g2333 339 Pfam CP12 domain 317 338 - -
Dod08g2333 339 Gene3D - 149 191 - -
Dod08g2333 339 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 78 119 IPR020828 GO:0051287
Dod08g2333 339 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 20 118 IPR020831 GO:0016620
Dod08g2333 339 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC 222 339 - -
Dod08g2333 339 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC 150 191 - -
Dod08g2333 339 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 190 224 IPR020831 GO:0016620
Dod08g2333 339 Gene3D Dihydrodipicolinate Reductase; domain 2 225 290 - -
Dod08g2333 339 SMART gp_dh_n_7 77 198 IPR020828 GO:0051287
Dod08g2333 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 76 193 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2333 Dod-Chr8 51416627 51431040 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2333 K05298 - gmx:100806482 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2333 08 51416627 51431040 Dod08g2333 08 51416627 51431040 ECH