Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2332 ATGTCATGTAAACTGGTGGAAAGTGATAGTAAAAGAAAGAAAATGAACTCTGCGGCAAACCCTAACAGCAAGAACCCTAAAAATAAAAATGCGTACCACATCGGAGGCCTGCAGGTGGAGTTTCCTTACCAGCCGTACGGGTCTCAGTTCGCGTTCATGGGAAGAGTGATCTCCACCCTCGACCGAGCTCACAGGGAAGGCCACTGCCACGCCTTGCTCGAGTCTCCTACTGGCACTGGCAAGTCCCTCTCCCTCCTCTGCTCCGCTCTCGCCTGGCAGCACCGTTACAAATCCCAACAGCTCCACCTCAAGCCCTCTTCTGAGGCTGTCACCGCCGATCCTCTTGCCTATGGTGGCGGCTTTGTTCCCGAGGATGACCACGTTTCCTCTGCATCTGATGATCCGGAGCACGTGGAAGCTGATCCCAACAACAAGAAGCAGAAGAAAAAGGCAGCGCCTACTATATATTACGCCTCGAGAACACACTCCCAAATTGCTCAAGTCATTCGCGAACTGCGGAAAACTACATACAGGGTTCCAATGGCTGTATTGGCATCACGGAAACATTACTGCACCAATAAGAATATAGTTGGCAAAGAGAATATTGATGAAGAATGTAAACTACTTCTGAAAGATCAAGAAATAGGGTGTCCAGAATTCAAAAATGCACATAAAGTCAAAGGTCATCCATCCCTTCAGAAAGGAGGATGCAATGAGGTGCATGACATAGAAGATCTTATAAAAGTTGGACAATCAGTGAAAGGTTGCTCTTATTATGCTGCTCGTTCTATGTCTGATGATGCACAGTTGGTATTCTGTCCATATAGCTACATCATTAATCCAGTGATTCGGGGAGCAATGGATGTGGATATTAAAGGAGCCATTGTGATACTTGATGAAGCTCACAATATAGAGGATATCACTCGAGATGCTGGCAGTGTGGATATTGAAGAGGATATTTTTGATAAATTGCAAATGGAGCTCCAACAACTATGTTCCGTAAATGCTGCAATTTACCAACCACTATATGAAATGGCACAGGGCCTTATTTGTTGGATAGAACGGAAGAAAAATAACCTAGACAAATGTGATTTCCAGCACTATGTGTCGTGCTGGACTGGTGATAAGGCATTAAGAGAGCTTGAAGAAGCAAATATTTCAAAACAATGCTTTGCTATCTTGCTAGAATGCGCTACCAAGGCAATCAAAGTCGCTACAGACTTGGAGACGGATTCGCAGCATTTAAGTGGCATGTCAGTGATAACATTGGAAGGCTTATTCTCTTCGCTAACTTATTTCTTCTCACGAAATGGATCTCATATGTTGGATTACCAGCTTGCTCTGCAGCGACATGTTAGAAAAGATGCTGGAAGAGCTTTTGGAAACTGGACGCACACTTTCAGTTTGTGGTGCTTGAATCCAGCAGTCGTGTTTAGAGATGTTGCTGATCTTTCTTTATCAGTCATCTTGACTTCTGGGACACTGTCACCAATGACTTCCTTTTCTTCCGAGCTTGGAGTTCAGTTTGAAACTAGTCTTGAAGCTCCACATGTAATTGATGTTGACTCACAGGTGTGGCCTGCTATAATCTCCACTGGTCCTGGTAATTATCCGTTGAATGCAAGTTATAAAACAGCAGATGGATATGCATTCCAGGATGCAGTTGGAAGATCTTTAGAAGAAATGTTCAAGATTGTTCCAGGTGGATGTCTTGTGTTCTTCCCAAGTTATAAACTGATGGAAAAGTTATGCAACCGTTGGTCTGAAACAGGTCAATGGTCTCGACTAAATGCAGAAAAGCCCCTTTTTGTTGAACCACGAGGGGGAAGCCAAGATGATTTTGAAATTGCATTAAAAGGGTATTATGACTCAATTCATCATGGTAAAAGACCTAATTCAGGAAGGAAAAGAAGGATTAAGAAAATTGATTCAAATCACTTCCATCCAGTTGATTCCCAAGAGAGTTTTAAGAAAGGAGCTGCTTTACTTGGTGTTTGTCGTGGAAAGGTTTCTGAAGGAATCGATTTCTCTGATGATAATGCCAGAGTAGTTATTATCGTTGGTATTCCATTTCCCAACATAAATGATATTCAAGTTGCACTAAAGAAGAAGTATAATGACACATACAAATCATCCAAAAATCTTCTAAGTGGAAATGAGTGGTACTGTCACCAAGCATTTCGAGCTTTAAATCAAGCAGCGGGGCGTTGTATACGGCATAAACTTGATTATGGAGCAATCGTCCTATTGGATGAACGTTTTCGGGAAGAAAGAAATAGAGCATTCATTTCAAAGTGGCTAAGAAGAAACTTGAAGGTTTATGACAGCTTTGAATCATCACTAGCAGGACTTAAATCATTCTTTGAGGATGCCAAGGAACGGTATGCAATGAGTACAGTAACTGTCAAACAGAATTTGGGCTTACATGGTGATGGTGTGCAAATCAAGAACCAGAATAAGAGATTCACTAGAAAGGAAAATCAGAAATTGAACAAGTCTTGTAATGGACGTGAGAAGGAAACATCAGTGATTGAGGATAATAGCTCTTTTCCCATACTAAGCTGTCAAGATCTTGCTGACAGTCAGCCACCAGCTCAAGGGAATGGTAACAAACACAATTGTGAAGACCATATAAACCTGCAATGCTGTAATCTGACAGAGCCAAGGTTTAATGGGGAATTATTGGTGGCAACTACACATGAAGAAAGCTCCATTGTCAAGGAAACTCCTTCTATAGATGTTGACAATGATCTGGGTAGCCCCAGTTACTCTAAGTATGACAACTCTGGTTCCACCATGATCGAGGCCTCTGCTCAATTTTCGAATCACTTATCAAGCCTTCCAGTGTGTTTAACTGATGGAAGTAAAAATTCCTCAGGGCTTCAGTCTTCGACAACTGTTACTCCTGAAAAGATTATGACTGCAAATAATATTCCTGAAATGGAATCACCTATGAATATGAGTGTTAATTCTCACTACCTCAAAAGGAGGAAGCCCGTGTTCTCGCCATTTATAAACCTCATAGAAGAAGAAAATTTAAATTATATTGCACCTTGTGCCAGCACTCTTACAACATACACTAAAAGCACACTGGATGTTAGAGAGGCAGCTCATGGAATTGAACATGGTTGTGAGAGAAATCTGAAGTCAAATACTCCTCAGTTAGCAACAAGGAATCTACCTGGTTCATGTTCACTAACTTTTCCCCTACTGGACAAAGAGTTGAAGATATTTTGTTCACTCTGCAAAAACCCAATGGGCCGACCTGAAAACAATCTATATCTTACATGTTCCTTGAATTTATTGTCAAAAGTTCACTTAAGAACCCTTTTGAGGCAGAGACTGAAAACTGACACTACCGACACATTAAAGAGTGTACCAGTTATTCTTACCGATTCTTCACTTGTTGATCAACGTATTTGCAATAGAATGCCTAACAGTGTACCAGAACAGGGTATTTGGTGCGCAGAGGATGGGTGTGTCTTCAGCTCTATTTTCTGTCCCTTCTGCAGTAATATCAACAATTTGCTAGGAGTTCAGATCATGGCAACCAATTCATCAAATATTCACTTACTTGACAAGATATTGTTTTACTTTGATTCTTTGGAGGTGAAGAACCATGAGGAATCAGGGAGTGGGGCTTCCAAGGAAGTGGATTTGAAGCCAGTTAATGATTCTGGCACGGACGAAATTGCTGTCTTGAATTCCATTGACAAGTATTCTTATCTTCCCCAACCAGAGAAATCAGAAGTCTGGAAGACTAGAAAATCAAAGAAGACCAAAACTGAAGCTGATAAGCCTGGAAATCTTGGTGCAGATTTGGCAACGATGCTGTGA 3837 0.4144 MSCKLVESDSKRKKMNSAANPNSKNPKNKNAYHIGGLQVEFPYQPYGSQFAFMGRVISTLDRAHREGHCHALLESPTGTGKSLSLLCSALAWQHRYKSQQLHLKPSSEAVTADPLAYGGGFVPEDDHVSSASDDPEHVEADPNNKKQKKKAAPTIYYASRTHSQIAQVIRELRKTTYRVPMAVLASRKHYCTNKNIVGKENIDEECKLLLKDQEIGCPEFKNAHKVKGHPSLQKGGCNEVHDIEDLIKVGQSVKGCSYYAARSMSDDAQLVFCPYSYIINPVIRGAMDVDIKGAIVILDEAHNIEDITRDAGSVDIEEDIFDKLQMELQQLCSVNAAIYQPLYEMAQGLICWIERKKNNLDKCDFQHYVSCWTGDKALRELEEANISKQCFAILLECATKAIKVATDLETDSQHLSGMSVITLEGLFSSLTYFFSRNGSHMLDYQLALQRHVRKDAGRAFGNWTHTFSLWCLNPAVVFRDVADLSLSVILTSGTLSPMTSFSSELGVQFETSLEAPHVIDVDSQVWPAIISTGPGNYPLNASYKTADGYAFQDAVGRSLEEMFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLNAEKPLFVEPRGGSQDDFEIALKGYYDSIHHGKRPNSGRKRRIKKIDSNHFHPVDSQESFKKGAALLGVCRGKVSEGIDFSDDNARVVIIVGIPFPNINDIQVALKKKYNDTYKSSKNLLSGNEWYCHQAFRALNQAAGRCIRHKLDYGAIVLLDERFREERNRAFISKWLRRNLKVYDSFESSLAGLKSFFEDAKERYAMSTVTVKQNLGLHGDGVQIKNQNKRFTRKENQKLNKSCNGREKETSVIEDNSSFPILSCQDLADSQPPAQGNGNKHNCEDHINLQCCNLTEPRFNGELLVATTHEESSIVKETPSIDVDNDLGSPSYSKYDNSGSTMIEASAQFSNHLSSLPVCLTDGSKNSSGLQSSTTVTPEKIMTANNIPEMESPMNMSVNSHYLKRRKPVFSPFINLIEEENLNYIAPCASTLTTYTKSTLDVREAAHGIEHGCERNLKSNTPQLATRNLPGSCSLTFPLLDKELKIFCSLCKNPMGRPENNLYLTCSLNLLSKVHLRTLLRQRLKTDTTDTLKSVPVILTDSSLVDQRICNRMPNSVPEQGIWCAEDGCVFSSIFCPFCSNINNLLGVQIMATNSSNIHLLDKILFYFDSLEVKNHEESGSGASKEVDLKPVNDSGTDEIAVLNSIDKYSYLPQPEKSEVWKTRKSKKTKTEADKPGNLGADLATML* 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2332 1278 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 294 303 IPR002464 -
Dod08g2332 1278 SMART deadxpd 37 339 IPR006554 GO:0003678|GO:0016818
Dod08g2332 1278 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 35 371 IPR014013 GO:0005524
Dod08g2332 1278 Gene3D - 45 353 IPR027417 -
Dod08g2332 1278 MobiDBLite consensus disorder prediction 123 151 - -
Dod08g2332 1278 Pfam Helicase C-terminal domain 559 769 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Dod08g2332 1278 MobiDBLite consensus disorder prediction 1248 1278 - -
Dod08g2332 1278 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 25 1145 IPR045028 -
Dod08g2332 1278 Pfam DEAD_2 157 319 IPR010614 GO:0003677|GO:0003678|GO:0005524
Dod08g2332 1278 MobiDBLite consensus disorder prediction 127 148 - -
Dod08g2332 1278 Gene3D - 536 782 IPR027417 -
Dod08g2332 1278 MobiDBLite consensus disorder prediction 15 29 - -
Dod08g2332 1278 MobiDBLite consensus disorder prediction 1 31 - -
Dod08g2332 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 750 IPR027417 -
Dod08g2332 1278 MobiDBLite consensus disorder prediction 1249 1266 - -
Dod08g2332 1278 SMART Cxpdneu3 577 756 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Dod08g2332 1278 CDD SF2_C_XPD 523 754 - -
Dod08g2332 1278 PANTHER FANCONI ANEMIA GROUP J PROTEIN 25 1145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2332 Dod-Chr8 51401663 51415453 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2332 K15362 - gmx:100779610 1919.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2332 08 51401663 51415453 Dod08g2332 08 51401663 51415453 ECH