Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2326 ATGGCTTTCGCCGCCAGTGCCTTGCTTTCGTCAACTTCAAACTTCCTCGGAACCAAAGTCCTACTATCTCCCCCAACCCCTAAAACAACCAAATCATCACTCCCGCCACCATTCTCCATCAAGACAAGGTTCCTAAACTCTCACAACAGCACCTCCAACAACCGAAGGCAATCCCTACCTTCCCAAGCAGCTCTATCCGCCCTGATATTCTCCTCCCTCACCCCTCATGCCCTGGCCTTAGACAACCCCACACCCCCATCTTCTCCTTCTCCTCCCCCAGTCATCGAAGCTCAGCAACAGAACCCTTCCTCCAATCAGAATTCGTCACCTTTCTCTCAGAACCTTCTCCTCACCGCCCCAAAACCCCAGTCCCAGGCCTCTCCTGACCTCCCCGAAGGCACCCAATGGCGCTACAGCGAGTTCCTCAACGCCGTCAAGAAGGGCAAGGTCGAGAGGGTCAGGTTCAGCAAGGACGGCTCCGCCCTCCAGCTCACCGCCGTCGACGGCCGCCGCGCCACGGTCATCGTCCCCAACGATCCCGACCTCATCGACATCCTCGCCATGAATGGCGTCGACATCTCCGTCTCCGAGGGCGAATCCGGTAACGGCCTCTTCAACTTCATCGGCAACCTTCTCTTCCCCTTCCTCGCCTTCGCCGGCCTCTTCCTCCTCTTCCGCAGGGCCCAGGGCGGGCCTGGCGGACCGGGCGGCCTCGGAGGGCCCATGGACTTCGGCCGCTCCAAGTCCAAGTTCCAGGAGGTTCCAGAAACCGGTGTGACCTTCGCTGACGTGGCAGGTGCTGACCAAGCAAAGCTTGAACTGCAGGAAGTTGTTGATTTTCTGAAGAATCCTGACAAGTACACTGCTCTGGGTGCTAAGATCCCAAAAGGGTGCCTTCTGGTGGGGCCACCGGGAACCGGGAAGACCCTTCTTGCTCGGGCGGTTGCCGGTGAGGCCGGGGTGCCTTTCTTCTCGTGTGCGGCTTCGGAGTTCGTGGAGCTGTTTGTTGGGGTTGGTGCTTCCCGTGTGAGGGACTTGTTCGAGAAGGCGAAGTCGAAGGCGCCTTGCATTGTGTTCATTGATGAGATTGATGCTGTTGGGAGGCAGAGAGGGGCGGGTCTCGGAGGCGGGAATGATGAGAGGGAGCAGACTATTAACCAGCTCTTGACTGAGATGGATGGCTTTTCTGGCAATTCCGGTGTCATTGTTTTGGCTGCGACTAACAGGCCTGATGTTCTTGACTCTGCTCTGCTGAGGCCTGGCAGGTTCGACAGGCAGGTTACTGTTGACAGACCTGATGTTGCTGGTAGGGTTAAGATTCTTCAGGTGCATTCCAGAGGAAAGGCACTAGCAAAGGATGTTGACTTTGAGAAAATTGCAAGAAGAACCCCAGGATTCACGGGGGCTGACCTGCAGAATCTGATGAATGAAGCAGCTATTCTCGCAGCCAGGCGTGACCTCAAGGAAATAAGTAAAGATGAGATATCTGATGCCCTTGAAAGGATCATTGCTGGACCAGAAAAGAAAAATGCTGTTGTCTCAGATGAGAAGAAGAAATTAGTGGCCTATCATGAGGCTGGGCATGCTCTAGTTGGTGCTTTGATGCCTGAATATGACCCTGTAGCCAAGATATCAATCATCCCTCGTGGCCAGGCTGGTGGTCTCACATTTTTTGCTCCCAGCGAAGAGAGGCTCGAGTCTGGACTGTACAGTAGAAGCTACTTGGAAAATCAGATGGCAGTTGCTCTAGGTGGAAGAGTTGCCGAAGAGGTAATTTTTGGGGAGGAAAATGTCACCACAGGAGCATCAAATGACTTTATGCAAGTTTCAAGGGTGGCAAGGCAGATGGTTGAGAGATTTGGGTTCAGCAAAAAGATTGGACAAGTTGCAATTGGCGGACCTGGTGGAAATCCATTCTTGGGTCAACAGATGTCAACGCAAAAAGATTATTCGATGGCAACTGCCGATGTAGTGGATGCAGAGGTAAGGGAGCTCGTAGAGACAGCCTATTCTAGGGCAAAGCAAATCATAACAGCCCACATTGACATCCTTCACAAGCTTGCGCAACTTCTCATTGAGAAAGAAACCGTGGATGGTGAAGAGTTCATGAGCCTATTCATTGACGGGCAAGCTGAGTTATATGTTGCTTAA 2151 0.5318 MAFAASALLSSTSNFLGTKVLLSPPTPKTTKSSLPPPFSIKTRFLNSHNSTSNNRRQSLPSQAALSALIFSSLTPHALALDNPTPPSSPSPPPVIEAQQQNPSSNQNSSPFSQNLLLTAPKPQSQASPDLPEGTQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVPNDPDLIDILAMNGVDISVSEGESGNGLFNFIGNLLFPFLAFAGLFLLFRRAQGGPGGPGGLGGPMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSTQKDYSMATADVVDAEVRELVETAYSRAKQIITAHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYVA* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2326 716 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 19 716 IPR005936 GO:0004176|GO:0004222|GO:0016020
Dod08g2326 716 Pfam Peptidase family M41 512 705 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Dod08g2326 716 Gene3D Peptidase M41 508 711 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Dod08g2326 716 PANTHER METALLOPROTEASE M41 FTSH 56 708 - -
Dod08g2326 716 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 205 705 IPR005936 GO:0004176|GO:0004222|GO:0016020
Dod08g2326 716 Pfam AAA+ lid domain 453 496 IPR041569 -
Dod08g2326 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 258 502 IPR027417 -
Dod08g2326 716 Gene3D - 249 431 IPR027417 -
Dod08g2326 716 MobiDBLite consensus disorder prediction 97 115 - -
Dod08g2326 716 ProSitePatterns AAA-protein family signature. 401 419 IPR003960 GO:0005524|GO:0016887
Dod08g2326 716 Gene3D - 432 507 - -
Dod08g2326 716 CDD AAA 265 430 - -
Dod08g2326 716 Pfam ATPase family associated with various cellular activities (AAA) 299 430 IPR003959 GO:0005524|GO:0016887
Dod08g2326 716 Gene3D - 131 202 - -
Dod08g2326 716 SUPERFAMILY FtsH protease domain-like 512 706 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Dod08g2326 716 MobiDBLite consensus disorder prediction 24 59 - -
Dod08g2326 716 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED 56 708 - -
Dod08g2326 716 MobiDBLite consensus disorder prediction 77 115 - -
Dod08g2326 716 MobiDBLite consensus disorder prediction 82 96 - -
Dod08g2326 716 SMART AAA_5 294 433 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2326 Dod-Chr8 51305841 51308983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2326 255 707 Miscellaneous Gene Families AT5G53170 49.780 1.82e-136 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2326 K03798 - zju:112488754 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2326 08 51305841 51308983 Dod08g2326 08 51305841 51308983 ECH