Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2291 ATGATAGTTGCAGAAGGAATCGACGATGAAGAGAAGTGGCTCGCTGAGGGAATCGCCGGCATTCAACACAACGCATTTTTCATGCATCGCGCCCTGGACGAGAACAATCTCAGAGACGCATTAAAATACTCGGCGCTGTTGCTATCGGAGCTTCGAACTTCGAGGCTCTCGCCTCACAAATACTATGAACTGTATATGAGAGCGTTTGATGAGCTGAGGAGGCTGGAGATGTTCTTCAAGGACGAGAGCAGACACGGTGTTTTGATTGTTGATATGTATGAGCTTGTTCAGCACGCTGGAAATATATTGCCTAGATTGTATCTCCTTTGCACGGTGGGATCAGTTTACCTGAGATGTAAGGATGCTCCTGTGAAGGATGTTCTTAAGGATCTGGTGGAAATGTGTCGCGGGGTTCAGCATCCAATTCGTGGTCTGTTTTTGAGGAGTTACCTTGCTCAAGTCAGTAGAGATAAGTTGCCTGATATAGGCTCTGAGTATGAAGGCGGGGACTCTGGAAGTGTCATGGATGCTGTTGAATTTGTTCTACAGAATTTCACAGAAATGAATAAGCTTTGGGTTCGATTGCAGCAGCATCAGGGACCCATTCGGATGAGAGAGAAGAGGGAGAAAGAAAGAAATGAGCTTCGCGATCTTGTAGGAAAGAATCTCCACGTTCTGAGTCAGATAGAGGGTGTGGACCTTGAAGTGTACAAAGACACTGTCCTTCCAAGTGTCTTAGAGCAGGTTGTCAACTGTAAAGATGAACTTGCCCAATTTTATCTCATGGAGTGCATAATCCAGGTTTTTCCAGATGAGTACCACTTGCAGACTCTTGAGACACTGTTAGGTGCTTGCCCCTTATTACAGCCAACAGTAGATATCAAGACAGTGTTATCTCAGTTAATGGACAGGTTGTCAAATTATGCTGCCTCGAATACTGAAGTATTGCCCGAATTTCTGCAAGTGGAAGCGTTTACCAAACTAAGCATTGCAATAGGCAGGGTGATAGAAGCACAGGTTGACATGCCTATTGTGGGAGCAATATCTTTGCATGTCTCTCTTCTGACATTTACTCTCCGTGTTCATCCCGATCGGCTTGATTATGTGGACCAAGTGCTGGGATCATGTGTGAAGAAGCTTTCTGGAAAACCAAAGCTCAATGACAATAGAGCAACAAAGCAAGTTGTTGCACTTTTAAGTGCTCCATTGGATAAATACAATGATATTGTGACTGCCCTGACACTTTCTAATTATCCCCGTGTAATGGATCATCTTGATAATCAAACAAATAAAGTCATGGCCATGGTTATTATCCAAAGTATTATGAAGAATAACACTTGCATATCTACTGCTGATAAGGTTGAAGTGTTATTTGAATTAATAAAAGGGCTTATTATGGATTTGGATGGAACAGATGCGGACGAGATTGATGAAGAAGATTTCAATGAGGAACAAAATTCTGTTGCACGCCTCATACACATGTTTCATAATGATGACCCAGAGGAAATGTTTAAGATAATATGTACTGTAAAGAAGCACATTATGAGTGGAGGACCAAGGCGCCTACCTTTTACAGTTCCTTCCATTATTTTTTCCGCACTCAGGTTGGTCAGGCAATTGCAAGGACAAGATGGAGATGTAGTGGGCGAAGAAGTTCCAACAACACCAAAAAAAATATTTCAGCTTTTAAATGAGATCATTGAAGCTCTTTCTTCTGTATCGTCTCCTGAACTGGCCCTGAGATTGTACCTGCAATGTGCTGAGGCAGCTAACGACTGTGACCTCGAGCCTGTTGCATATGAGTTTTTCACCCAGGCATTTGTATTATATGAAGAAGAAATTGCGGACTCTAAAGCCCAAGTAACCGCAATACATCTTATTATTGGGACTCTTCAGAGGATGAACGTCTTTGGAGTTGAGAACAGGGATACATTAACTCACAAGGCCACAGGGTATTCAGCAAAACTTCTGAAGAAGCCTGATCAGTGCCGAGCAGTCTATGCATGCTCTCATCTCTTTTGGGTTGATGATCAAGATGGTATTAAAGATGGAGAAAGGGTATTGCTTTGCCTTAAGCGTGCATTGAGGATAGCAAATGCTGCTCAGCAAATGGCCAATGTAGCGAGGGGTAGCAGTGGTCCAGTAACGCTTTTTGTTGAAATACTGAACAAGTACATATACTATTTTGAGAAAGGAAACCCACAGATCACAAGTGCTACAATCCAGGGGCTAATCGAATTAATCACAACTGAGTTGCAGACCGACTCTGCATCAGCTCTTCCAACTTCAGATCCCTTCTTTGCCAGCACATTACGGTACATCCAATTCCAAAAACAGAAGGGCGGTATACTGGGTGAGAAGTATGATTCCATCAAGGTCTGA 2382 0.4295 MIVAEGIDDEEKWLAEGIAGIQHNAFFMHRALDENNLRDALKYSALLLSELRTSRLSPHKYYELYMRAFDELRRLEMFFKDESRHGVLIVDMYELVQHAGNILPRLYLLCTVGSVYLRCKDAPVKDVLKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLPDIGSEYEGGDSGSVMDAVEFVLQNFTEMNKLWVRLQQHQGPIRMREKREKERNELRDLVGKNLHVLSQIEGVDLEVYKDTVLPSVLEQVVNCKDELAQFYLMECIIQVFPDEYHLQTLETLLGACPLLQPTVDIKTVLSQLMDRLSNYAASNTEVLPEFLQVEAFTKLSIAIGRVIEAQVDMPIVGAISLHVSLLTFTLRVHPDRLDYVDQVLGSCVKKLSGKPKLNDNRATKQVVALLSAPLDKYNDIVTALTLSNYPRVMDHLDNQTNKVMAMVIIQSIMKNNTCISTADKVEVLFELIKGLIMDLDGTDADEIDEEDFNEEQNSVARLIHMFHNDDPEEMFKIICTVKKHIMSGGPRRLPFTVPSIIFSALRLVRQLQGQDGDVVGEEVPTTPKKIFQLLNEIIEALSSVSSPELALRLYLQCAEAANDCDLEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVTLFVEILNKYIYYFEKGNPQITSATIQGLIELITTELQTDSASALPTSDPFFASTLRYIQFQKQKGGILGEKYDSIKV* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2291 793 Gene3D - 469 778 IPR042491 -
Dod08g2291 793 Pfam Vacuolar protein sorting-associated protein 35 13 750 IPR005378 GO:0015031|GO:0030906|GO:0042147
Dod08g2291 793 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 3 793 - -
Dod08g2291 793 PANTHER VACUOLAR SORTING PROTEIN 35 3 793 IPR005378 GO:0015031|GO:0030906|GO:0042147
Dod08g2291 793 PIRSF Retromer_Vps35 3 793 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2291 Dod-Chr8 50957408 50966227 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2291 K18468 - gmx:100778365 1462.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2291 08 50957408 50966227 Dod08g2291 08 50957408 50966227 ECH