Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2280 ATGAAGGCAACCAAGAGGCCGATCCATGCGGTGTCGAGGTGGGTTCGGCGGCAACCGCCGAAGATGAAGGCGTTTCTGGCGGTGGCATGTGGGGTGGTGGCGTTGGTGTTCCTAAGAATGGTGGTTCACAATCATGACAACCTCTTTGTGGCATCTGAGGCCGTTCATGCATTAGGAATATCCGTACTAATTTACAAGCTCACCAAGGAGAATTCTTGTGCCGGACTTTCACTCAAATCACAGGAACTGACAGCTATGTTTCTAGCTGTTAGACTCTATTGCAGTGTTGTCATGGAATATGATATACACACCTTGCTTGATTTGGCAACATTGGCAACTACCCTTTGGGTTATTTACATGATTCGCTTCAAGCTGAATTCTAGTTACATGGATGATAAGGACAACTTTGCAATACACTATGTAGTGATACCTTGTGCTGTGCTTTCCTTGCTTACTCATCCAACAACACAGCATCATATTGTTAACAGGATTCTCTGGGGATTTTGTGTTTTTCTTGAAGCTGTTTCTGTACTCCCTCAGTTGCAAGTCATGCAGAACACTAAGATTGTTGAACCATTCACAGCACACTATGTTTTTGCCCTTGGAATTGCAAGGTTCTTGAGTTGTGCTCATTGGGTCCTTCAGGTATTAGATACTAGAGGACGTCTACTAACGGCTTTGGGTTATGGATTGTGGCCTTCAATGGTACTCCTATCGGAAATTGTTCAGACTTTCATCCTAGCAGATTTTTGCTACTACTATGTCAAGAGCCTTGTTGGTGGACAACTTGTTTTTCGGCTTCCTTCAGGAGTGGTGTAA 819 0.442 MKATKRPIHAVSRWVRRQPPKMKAFLAVACGVVALVFLRMVVHNHDNLFVASEAVHALGISVLIYKLTKENSCAGLSLKSQELTAMFLAVRLYCSVVMEYDIHTLLDLATLATTLWVIYMIRFKLNSSYMDDKDNFAIHYVVIPCAVLSLLTHPTTQHHIVNRILWGFCVFLEAVSVLPQLQVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYVKSLVGGQLVFRLPSGVV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2280 272 PANTHER LUMEN PROTEIN RETAINING RECEPTOR, PUTATIVE-RELATED 1 271 - -
Dod08g2280 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Dod08g2280 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Dod08g2280 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Dod08g2280 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Dod08g2280 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Dod08g2280 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Dod08g2280 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2280 Dod-Chr8 50810952 50815333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2280 1 272 Miscellaneous Gene Families AT4G38790 79.487 2.79e-166 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2280 - K10949 cpap:110818011 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2280 08 50810952 50815333 Dod08g2280 08 50810952 50815333 ECH